Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CblR in Haloquadratum walsbyi DSM 16790

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family:
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector:
Regulog: CblR - Halobacteriales
Statistics of regulated genes:
- Genes 23
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 91 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -45
Score: 4.2
Sequence: ATATCAACCTTTTTTGCACT
Locus tag: HQ2296A
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: HQ2297A
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
HQ2296A
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
HQ2297A
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Position: -236
Score: 4.3
Sequence: GTTGCAACCCCGGTTGGATT
Locus tag: HQ2298A
Name: cbiJ
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
HQ2298A
cbiJ
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Position: -26
Score: 4.6
Sequence: ACTGCAAGTGCGTTTGTATA
Locus tag: HQ1627A
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: HQ1626A
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
HQ1627A
btuC
Vitamin B12 ABC transporter, permease component BtuC
HQ1626A
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
Position: -126
Score: 5.3
Sequence: AAAACAATTACGCTTGCTCT
Position: -60
Score: 5.5
Sequence: AGTACAAGCAAAATTGTTTT
Locus tag: HQ1835A
Name: cbiM
Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: HQ1836A
Name: cbiN
Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: HQ1837A
Name: cbiQ
Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: HQ1838A
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
HQ1835A
cbiM
Substrate-specific component CbiM of cobalt ECF transporter
HQ1836A
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter
HQ1837A
cbiQ
Transmembrane component CbiQ of energizing module of cobalt ECF transporter
HQ1838A
cbiO
ATPase component CbiO of energizing module of cobalt ECF transporter
Position: -64
Score: 4.6
Sequence: TATACAAACGCACTTGCAGT
Locus tag: HQ1628A
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
HQ1628A
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Position: -113
Score: 5.5
Sequence: AAAACAATTTTGCTTGTACT
Position: -47
Score: 5.3
Sequence: AGAGCAAGCGTAATTGTTTT
Locus tag: HQ1834A
Name: cbiT
Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: HQ1833A
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: HQ1832A
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: HQ1831A
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: HQ1830A
Name: VNG1558H
Funciton: conserved cobalamin operon protein
Locus tag: HQ1829A
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
HQ1834A
cbiT
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
HQ1833A
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
HQ1832A
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
HQ1831A
cbiG
Cobalamin biosynthesis protein CbiG
HQ1830A
VNG1558H
conserved cobalamin operon protein
HQ1829A
cbiA
Cobyrinic acid A,C-diamide synthase
Position: -107
Score: 5.3
Sequence: AAGACAACCGTAATTGTTTT
Locus tag: HQ3035A
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: HQ3034A
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: HQ3033A
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: HQ3032B
Name: VNG1559H
Funciton: conserved cobalamin operon protein
Locus tag: HQ3032A
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
Locus tag: HQ3031A
Name: VNG1562H
Funciton: conserved cobalamin operon protein
HQ3035A
cbiG
Cobalamin biosynthesis protein CbiG
HQ3034A
cbiH
Cobalt-precorrin-3b C17-methyltransferase
HQ3033A
cbiH
Cobalt-precorrin-3b C17-methyltransferase
HQ3032B
VNG1559H
conserved cobalamin operon protein
HQ3032A
cbiK
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
HQ3031A
VNG1562H
conserved cobalamin operon protein
Position: -18
Score: 4.2
Sequence: AGTGCAAAAAAGGTTGATAT
Locus tag: HQ2295A
Name: chlID
Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
HQ2295A
chlID
ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
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