Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CblR in Halomicrobium mukohataei DSM 12286

Properties
Regulator type: Transcription factor
TF locus tag:
Regulator family:
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector:
Regulog: CblR - Halobacteriales
Statistics of regulated genes:
- Genes 31
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 91 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -56
Score: 4.7
Sequence: ATAGCAAGCACAATTGGTGT
Position: -36
Score: 5
Sequence: AGTACAACTACACTTGTACC
Locus tag: Hmuk_1856
Name: cbiD-II
Funciton: B12 biosynthesis-related protein, possible CbiD equivalent
Hmuk_1856
cbiD-II
B12 biosynthesis-related protein, possible CbiD equivalent
Position: -21
Score: 4.1
Sequence: ATCCCAACTGTGGTTGGAAC
Locus tag: Hmuk_2792
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Hmuk_2793
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Hmuk_2792
btuC
Vitamin B12 ABC transporter, permease component BtuC
Hmuk_2793
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
Position: -136
Score: 4.9
Sequence: TAATCAAGTCTAATTGTACT
Locus tag: Hmuk_3351
Name: nrdR
Funciton: Ribonucleotide reductase transcriptional regulator NrdR
Locus tag: Hmuk_3350
Name: nrdB2
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Hmuk_3349
Name: nrdA2
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Hmuk_3351
nrdR
Ribonucleotide reductase transcriptional regulator NrdR
Hmuk_3350
nrdB2
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Hmuk_3349
nrdA2
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Position: -229
Score: 4.7
Sequence: TTTACAATCTAGTTTGTACT
Locus tag: Hmuk_1862
Name: cbtA
Funciton: Predicted cobalt transporter CbtA
Locus tag: Hmuk_1863
Name: cbiX_2
Funciton: conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein)
Hmuk_1862
cbtA
Predicted cobalt transporter CbtA
Hmuk_1863
cbiX_2
conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein)
Position: -38
Score: 4.7
Sequence: TTTACAATCTAGTTTGTACT
Locus tag: Hmuk_1861
Name: cbtB
Funciton: Cobalt transporter subunit CbtB, putative
Hmuk_1861
cbtB
Cobalt transporter subunit CbtB, putative
Position: -9
Score: 5.5
Sequence: AATACAAGCATGATTGATTT
Locus tag: Hmuk_1860
Name: chlID
Funciton: ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
Hmuk_1860
chlID
ChlI component of cobalt chelatase involved in B12 biosynthesis / ChlD component of cobalt chelatase involved in B12 biosynthesis
Position: -32
Score: 4.6
Sequence: AGTTCAAGTGTGCTTGCGGT
Locus tag: Hmuk_0145
Name: VNG1577C
Funciton: conserved cobalamine operon protein, HAD family hydrolase
Locus tag: Hmuk_0144
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Hmuk_0143
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Hmuk_0142
Name: cobY
Funciton: Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
Locus tag: Hmuk_0141
Name: cobD
Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Hmuk_0140
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Hmuk_0139
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Hmuk_0145
VNG1577C
conserved cobalamine operon protein, HAD family hydrolase
Hmuk_0144
cbiB
Adenosylcobinamide-phosphate synthase
Hmuk_0143
cobS
Cobalamin synthase
Hmuk_0142
cobY
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62)
Hmuk_0141
cobD
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Hmuk_0140
cbiZ
Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Hmuk_0139
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Position: -46
Score: 5.7
Sequence: AAAACAACCAAAATTGTTTT
Locus tag: Hmuk_1874
Name: cbiT
Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: Hmuk_1873
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Hmuk_1872
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Hmuk_1871
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Hmuk_1870
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: Hmuk_1869
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: Hmuk_1868
Name: VNG1558H
Funciton: conserved cobalamin operon protein
Locus tag: Hmuk_1867
Name: VNG1559H
Funciton: conserved cobalamin operon protein
Locus tag: Hmuk_1866
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
Locus tag: Hmuk_1865
Name: VNG1562H
Funciton: conserved cobalamin operon protein
Hmuk_1874
cbiT
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Hmuk_1873
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Hmuk_1872
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Hmuk_1871
cbiG
Cobalamin biosynthesis protein CbiG
Hmuk_1870
cbiH
Cobalt-precorrin-3b C17-methyltransferase
Hmuk_1869
cbiH
Cobalt-precorrin-3b C17-methyltransferase
Hmuk_1868
VNG1558H
conserved cobalamin operon protein
Hmuk_1867
VNG1559H
conserved cobalamin operon protein
Hmuk_1866
cbiK
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
Hmuk_1865
VNG1562H
conserved cobalamin operon protein
Position: -60
Score: 4.1
Sequence: GTTCCAACCACAGTTGGGAT
Locus tag: Hmuk_2791
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Hmuk_2791
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Position: -45
Score: 5.5
Sequence: AAATCAATCATGCTTGTATT
Locus tag: Hmuk_1859
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Hmuk_1858
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Hmuk_1857
Name: cbiJ
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Hmuk_1859
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
Hmuk_1858
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Hmuk_1857
cbiJ
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
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