Regulon of CblR in Haloferax volcanii DS2
| Regulator type: | Transcription factor |
| TF locus tag: | |
| Regulator family: | |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | |
| Regulog: | CblR - Halobacteriales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Halobacteriales
- By trascription factor - CblR
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -150
Score: 5 Sequence: AAACCAAGCACAGTTGTAAA
Position: -123
Score: 5.1 Sequence: AGAACAAGCGAGATTGTGTT
Position: -47
Score: 5.4 Sequence: ACAACAAGCACAATTGTTTT
Locus tag: HVO_B0062
Name: cbiT Funciton: Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Locus tag: HVO_B0061
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: HVO_B0060
Name: cbiF Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: HVO_B0059
Name: cbiG Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: HVO_B0058
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: HVO_B0057
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
Locus tag: HVO_B0056
Name: VNG1558H Funciton: conserved cobalamin operon protein
Locus tag: HVO_B0055
Name: VNG1559H Funciton: conserved cobalamin operon protein
Locus tag: HVO_B0054
Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
Locus tag: HVO_B0053
Name: VNG1562H Funciton: conserved cobalamin operon protein |
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cbiT
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Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
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cbiL
|
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiF
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Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
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cbiG
|
Cobalamin biosynthesis protein CbiG
|
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cbiH
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Cobalt-precorrin-3b C17-methyltransferase
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cbiH
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Cobalt-precorrin-3b C17-methyltransferase
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VNG1558H
|
conserved cobalamin operon protein
|
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VNG1559H
|
conserved cobalamin operon protein
|
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cbiK
|
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis
|
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VNG1562H
|
conserved cobalamin operon protein
|
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Position: -227
Score: 5 Sequence: TTTACAACTGTGCTTGGTTT
Locus tag: HVO_B0064
Name: cbtA Funciton: Predicted cobalt transporter CbtA
Locus tag: HVO_B0065
Name: cbiX_2 Funciton: conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein) |
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cbtA
|
Predicted cobalt transporter CbtA
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cbiX_2
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conserved cobalamin cluster protein CbiX 2 (probable ferredoxin-like iron-sulfur protein)
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Position: -142
Score: 5.4 Sequence: AAAACAATTGTGCTTGTTGT
Position: -66
Score: 5.1 Sequence: AACACAATCTCGCTTGTTCT
Position: -39
Score: 5 Sequence: TTTACAACTGTGCTTGGTTT
Locus tag: HVO_B0063
Name: cbtB Funciton: Cobalt transporter subunit CbtB, putative |
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cbtB
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Cobalt transporter subunit CbtB, putative
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |