Regulon of RbsR in Shewanella pealeana ATCC 700345
| Regulator type: | Transcription factor |
| TF locus tag: | Spea_0519 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Regulog: | RbsR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - RbsR
- By TF family - LacI
- By effector - Ribose
- By pathway - Ribose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -126
Score: 6.2 Sequence: ATATCGAAACGTTTCGATTA
Position: -93
Score: 6.3 Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Spea_0514
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Spea_0515
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Spea_0516
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Spea_0517
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Spea_0518
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Spea_0519
Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family |
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rbsD
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D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
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rbsA
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Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
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rbsC
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Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
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rbsB
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Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
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rbsK
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Ribokinase (EC 2.7.1.15)
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rbsR
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Transcriptional repressor of ribose utilization, LacI family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |