Regulon of PrpR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shal_1960
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Methylcitrate utilization
Effector:	2-methylcitrate
Regulog:	PrpR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 48 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PrpR
By TF family - GntR/Others
By effector - 2-methylcitrate
By pathway - Methylcitrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -93 Score: 5.5 Sequence: TTTGTCGACAAT Position: -71 Score: 5.2 Sequence: ATTGTTGACAAT Position: -41 Score: 5.9 Sequence: ATTGTCGACAAT Locus tag: Shal_1960 Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family Locus tag: Shal_1961 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: Shal_1962 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: Shal_1963 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: Shal_1964 Name: prpF Funciton: Aconitase accessory protein PrpF
	Shal_1960	prpR	Propionate catabolism operon transcriptional regulator of GntR family
	Shal_1961	prpB	Methylisocitrate lyase (EC 4.1.3.30)
	Shal_1962	prpC	2-methylcitrate synthase (EC 2.3.3.5)
	Shal_1963	acnD	Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
	Shal_1964	prpF	Aconitase accessory protein PrpF

Export
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