Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PrpR in Shewanella loihica PV-4

Properties
Regulator type: Transcription factor
TF locus tag: Shew_1819, Shew_0280
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Methylcitrate utilization
Effector: 2-methylcitrate
Regulog: PrpR - Shewanellaceae
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 48 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -150
Score: 4.4
Sequence: GTTGTCAACAAA
Position: -54
Score: 5.2
Sequence: ATTGTTGACAAT
Locus tag: Shew_0280
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Shew_0280
prpR
Propionate catabolism operon transcriptional regulator of GntR family
Position: -292
Score: 5.5
Sequence: TTTGTCGACAAT
Position: -92
Score: 5.5
Sequence: TTTGTCGACAAT
Position: -40
Score: 5.4
Sequence: ATTGTCGACAAC
Locus tag: Shew_1819
Name: prpR
Funciton: Propionate catabolism operon transcriptional regulator of GntR family
Locus tag: Shew_1820
Name: prpB
Funciton: Methylisocitrate lyase (EC 4.1.3.30)
Locus tag: Shew_1821
Name: prpC
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
Locus tag: Shew_1822
Name: acnD
Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Locus tag: Shew_1823
Name: prpF
Funciton: Aconitase accessory protein PrpF
Shew_1819
prpR
Propionate catabolism operon transcriptional regulator of GntR family
Shew_1820
prpB
Methylisocitrate lyase (EC 4.1.3.30)
Shew_1821
prpC
2-methylcitrate synthase (EC 2.3.3.5)
Shew_1822
acnD
Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
Shew_1823
prpF
Aconitase accessory protein PrpF
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