Regulon of PrpR in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_3293
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Methylcitrate utilization
Effector:	2-methylcitrate
Regulog:	PrpR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 48 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PrpR
By TF family - GntR/Others
By effector - 2-methylcitrate
By pathway - Methylcitrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -228 Score: 4.8 Sequence: GTTGTTGACAAT Position: -83 Score: 5.2 Sequence: ATTGTTGACAAT Locus tag: Sama_3293 Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family Locus tag: Sama_3294 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: Sama_3295 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: Sama_3296 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: Sama_3297 Name: prpF Funciton: Aconitase accessory protein PrpF
	Sama_3293	prpR	Propionate catabolism operon transcriptional regulator of GntR family
	Sama_3294	prpB	Methylisocitrate lyase (EC 4.1.3.30)
	Sama_3295	prpC	2-methylcitrate synthase (EC 2.3.3.5)
	Sama_3296	acnD	Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
	Sama_3297	prpF	Aconitase accessory protein PrpF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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