Regulon of PrpR in Shewanella oneidensis MR-1

Properties
Regulator type:	Transcription factor
TF locus tag:	SO0346
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Methylcitrate utilization
Effector:	2-methylcitrate
Regulog:	PrpR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 48 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - PrpR
By TF family - GntR/Others
By effector - 2-methylcitrate
By pathway - Methylcitrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -256 Score: 5.9 Sequence: ATTGTCGACAAT Position: -125 Score: 5.2 Sequence: ATTGTTGACAAT Position: -86 Score: 5.9 Sequence: ATTGTCGACAAT Locus tag: SO0346 Name: prpR Funciton: Propionate catabolism operon transcriptional regulator of GntR family Locus tag: SO0345 Name: prpB Funciton: Methylisocitrate lyase (EC 4.1.3.30) Locus tag: SO0344 Name: prpC Funciton: 2-methylcitrate synthase (EC 2.3.3.5) Locus tag: SO0343 Name: acnD Funciton: Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) Locus tag: SO0342 Name: prpF Funciton: Aconitase accessory protein PrpF
	SO0346	prpR	Propionate catabolism operon transcriptional regulator of GntR family
	SO0345	prpB	Methylisocitrate lyase (EC 4.1.3.30)
	SO0344	prpC	2-methylcitrate synthase (EC 2.3.3.5)
	SO0343	acnD	Aconitate hydratase, predicted 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
	SO0342	prpF	Aconitase accessory protein PrpF

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD