Regulon of NtrC in Shewanella piezotolerans WP3

Properties
Regulator type:	Transcription factor
TF locus tag:	swp_0249
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -136 Score: 5.4 Sequence: TGCACCCGATTGGTGCA Locus tag: swp_3956 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: swp_3955 Name: amtB Funciton: ammonium transporter
	swp_3956	glnB	nitrogen regulatory protein P-II 1
	swp_3955	amtB	ammonium transporter
Position: -79 Score: 6.1 Sequence: CGCACCATTTTGGTGCA Position: -66 Score: 6 Sequence: TGCACCATAGTGGTGCA Position: -39 Score: 4.8 Sequence: CGTTCCAAAATGGTGCA Locus tag: swp_0250 Name: ntrB Funciton: nitrogen regulation protein Locus tag: swp_0249 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	swp_0250	ntrB	nitrogen regulation protein
	swp_0249	ntrC	nitrogen regulation protein NR(I)
Position: -218 Score: 4.7 Sequence: TGCACGATTATGAAGCA Position: -201 Score: 4.8 Sequence: CGCACCAAAATGATCCA Position: -179 Score: 4.9 Sequence: CGCACCATTAGAGTGCA Locus tag: swp_0268 Name: glnA Funciton: glutamine synthetase, type I
	swp_0268	glnA	glutamine synthetase, type I

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD