Regulon of NtrC in Shewanella pealeana ATCC 700345

Properties
Regulator type:	Transcription factor
TF locus tag:	Spea_3930
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -135 Score: 5.5 Sequence: TGCACCTTGCTGGTGCA Locus tag: Spea_0833 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: Spea_0834 Name: amtB Funciton: ammonium transporter
	Spea_0833	glnB	nitrogen regulatory protein P-II 1
	Spea_0834	amtB	ammonium transporter
Position: -79 Score: 6 Sequence: TGCACCATTTCGGTGCA Locus tag: Spea_3929 Name: ntrB Funciton: nitrogen regulation protein Locus tag: Spea_3930 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	Spea_3929	ntrB	nitrogen regulation protein
	Spea_3930	ntrC	nitrogen regulation protein NR(I)
Position: -202 Score: 4.7 Sequence: TGCACCATATAGATCCA Position: -180 Score: 5.8 Sequence: CGCACCAAAATGGTGCG Locus tag: Spea_3916 Name: glnA Funciton: glutamine synthetase, type I
	Spea_3916	glnA	glutamine synthetase, type I

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD