Regulon of NtrC in Shewanella frigidimarina NCIMB 400

Properties
Regulator type:	Transcription factor
TF locus tag:	Sfri_0320
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -197 Score: 5.4 Sequence: TGCACGAGGTTGGTGCA Locus tag: Sfri_0325 Name: glnA Funciton: glutamine synthetase, type I
	Sfri_0325	glnA	glutamine synthetase, type I
Position: -183 Score: 5.4 Sequence: TGCACCAAAACGATGCA Locus tag: Sfri_0623 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: Sfri_0624 Name: amtB Funciton: ammonium transporter
	Sfri_0623	glnB	nitrogen regulatory protein P-II 1
	Sfri_0624	amtB	ammonium transporter
Position: -50 Score: 6.1 Sequence: CGCACCAAATTGGTGCA Position: -37 Score: 5.7 Sequence: TGCATCATAATGGTGCA Locus tag: Sfri_0321 Name: ntrB Funciton: nitrogen regulation protein Locus tag: Sfri_0320 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	Sfri_0321	ntrB	nitrogen regulation protein
	Sfri_0320	ntrC	nitrogen regulation protein NR(I)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD