Regulon of NtrC in Shewanella sp ANA-3

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewana3_0258
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -247 Score: 4.6 Sequence: TGCACTAAAATGGTGTT Position: -180 Score: 5.6 Sequence: CGCACCAATATAGTGCA Locus tag: Shewana3_0300 Name: glnA Funciton: glutamine synthetase, type I
	Shewana3_0300	glnA	glutamine synthetase, type I
Position: -143 Score: 5.2 Sequence: TGCACAAGTCTGGTGCA Locus tag: Shewana3_3532 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: Shewana3_3531 Name: amtB Funciton: ammonium transporter
	Shewana3_3532	glnB	nitrogen regulatory protein P-II 1
	Shewana3_3531	amtB	ammonium transporter
Position: -52 Score: 6 Sequence: TGCACCAAATCGGTGCA Position: -39 Score: 5.5 Sequence: TGCAACATAATGGTGCA Locus tag: Shewana3_0259 Name: ntrB Funciton: nitrogen regulation protein Locus tag: Shewana3_0258 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	Shewana3_0259	ntrB	nitrogen regulation protein
	Shewana3_0258	ntrC	nitrogen regulation protein NR(I)
Position: -182 Score: 4.8 Sequence: TGCACCATCACAGCGCA Position: -169 Score: 5 Sequence: CGCACCAAATCGGGGCG Locus tag: Shewana3_0779 Name: glnK2 Funciton: nitrogen regulatory protein P-II Locus tag: Shewana3_0778 Name: amtB2 Funciton: ammonium transporter
	Shewana3_0779	glnK2	nitrogen regulatory protein P-II
	Shewana3_0778	amtB2	ammonium transporter

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