Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Shewanella sp MR-7

Properties
Regulator type: Transcription factor
TF locus tag: Shewmr7_3764
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes 7
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 94 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -143
Score: 5.2
Sequence: TGCACAAGTCTGGTGCA
Locus tag: Shewmr7_0591
Name: glnB
Funciton: nitrogen regulatory protein P-II 1
Locus tag: Shewmr7_0592
Name: amtB
Funciton: ammonium transporter
glnB
nitrogen regulatory protein P-II 1
amtB
ammonium transporter

Position: -52
Score: 6
Sequence: TGCACCAAATCGGTGCA
Position: -39
Score: 5.5
Sequence: TGCAACATAATGGTGCA
Locus tag: Shewmr7_3763
Name: ntrB
Funciton: nitrogen regulation protein
Locus tag: Shewmr7_3764
Name: ntrC
Funciton: nitrogen regulation protein NR(I)
ntrB
nitrogen regulation protein
ntrC
nitrogen regulation protein NR(I)

Position: -169
Score: 5
Sequence: CGCACCAAATCGGGGCG
Locus tag: Shewmr7_0808
Name: glnK2
Funciton: nitrogen regulatory protein P-II
Locus tag: Shewmr7_0807
Name: amtB2
Funciton: ammonium transporter
glnK2
nitrogen regulatory protein P-II
amtB2
ammonium transporter

Position: -183
Score: 5.6
Sequence: AGCACCAACATGGTGCA
Locus tag: Shewmr7_3719
Name: glnA
Funciton: glutamine synthetase, type I
glnA
glutamine synthetase, type I
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