Regulon of NtrC in Shewanella sp MR-7

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewmr7_3764
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -143 Score: 5.2 Sequence: TGCACAAGTCTGGTGCA Locus tag: Shewmr7_0591 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: Shewmr7_0592 Name: amtB Funciton: ammonium transporter
	Shewmr7_0591	glnB	nitrogen regulatory protein P-II 1
	Shewmr7_0592	amtB	ammonium transporter
Position: -52 Score: 6 Sequence: TGCACCAAATCGGTGCA Position: -39 Score: 5.5 Sequence: TGCAACATAATGGTGCA Locus tag: Shewmr7_3763 Name: ntrB Funciton: nitrogen regulation protein Locus tag: Shewmr7_3764 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	Shewmr7_3763	ntrB	nitrogen regulation protein
	Shewmr7_3764	ntrC	nitrogen regulation protein NR(I)
Position: -169 Score: 5 Sequence: CGCACCAAATCGGGGCG Locus tag: Shewmr7_0808 Name: glnK2 Funciton: nitrogen regulatory protein P-II Locus tag: Shewmr7_0807 Name: amtB2 Funciton: ammonium transporter
	Shewmr7_0808	glnK2	nitrogen regulatory protein P-II
	Shewmr7_0807	amtB2	ammonium transporter
Position: -183 Score: 5.6 Sequence: AGCACCAACATGGTGCA Locus tag: Shewmr7_3719 Name: glnA Funciton: glutamine synthetase, type I
	Shewmr7_3719	glnA	glutamine synthetase, type I

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD