Regulon of NtrC in Shewanella sp W3-18-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Sputw3181_0221
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Shewanellaceae
Statistics of regulated genes:
- Genes	6
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -184 Score: 5.6 Sequence: CGCACCATTATAGTGCA Locus tag: Sputw3181_0266 Name: glnA Funciton: glutamine synthetase, type I
	Sputw3181_0266	glnA	glutamine synthetase, type I
Position: -52 Score: 6 Sequence: TGCACCAAATCGGTGCA Position: -39 Score: 5 Sequence: TGCATCATGTTGATGCA Locus tag: Sputw3181_0222 Name: ntrB Funciton: nitrogen regulation protein Locus tag: Sputw3181_0221 Name: ntrC Funciton: nitrogen regulation protein NR(I)
	Sputw3181_0222	ntrB	nitrogen regulation protein
	Sputw3181_0221	ntrC	nitrogen regulation protein NR(I)
Position: -143 Score: 5.5 Sequence: TGCACAAATGTGGTGCA Locus tag: Sputw3181_0700 Name: glnB Funciton: nitrogen regulatory protein P-II 1 Locus tag: Sputw3181_0701 Name: amtB Funciton: ammonium transporter
	Sputw3181_0700	glnB	nitrogen regulatory protein P-II 1
	Sputw3181_0701	amtB	ammonium transporter
Position: -109 Score: 5 Sequence: TGCACCGAAATAATGCA Position: -96 Score: 5.4 Sequence: TGCACCTATATGGAGCA Locus tag: Sputw3181_3358 Name: glnK2 Funciton: nitrogen regulatory protein P-II
	Sputw3181_3358	glnK2	nitrogen regulatory protein P-II

Export
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