Regulon of LexA in Rhodococcus sp. RHA1

Properties
Regulator type:	Transcription factor
TF locus tag:	RHA1_ro06788, RHA1_ro00572
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Nocardiaceae
Statistics of regulated genes:
- Genes	11
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Nocardiaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -89 Score: 5.3 Sequence: TCGAACTCCCGTTCGA Locus tag: RHA1_ro06227 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RHA1_ro06227	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -192 Score: 5.2 Sequence: TCGATCACGCGTTCGA Position: -176 Score: 5.1 Sequence: AAGAACACATGTTCGA Position: -113 Score: 5.6 Sequence: TCGAACAGATGTTTGA Locus tag: RHA1_ro06788 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	RHA1_ro06788	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -36 Score: 5.6 Sequence: TCGAACAGCTGTTCGG Locus tag: RHA1_ro06892 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: RHA1_ro06893 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: RHA1_ro06894 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	RHA1_ro06892	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	RHA1_ro06893	ruvA	Holliday junction DNA helicase RuvA
	RHA1_ro06894	ruvB	Holliday junction DNA helicase RuvB
Position: -111 Score: 5 Sequence: TCGAACACACGTTCCC Locus tag: RHA1_ro06765 Name: recA Funciton: Recombinase A Locus tag: RHA1_ro06766 Name: recX Funciton: Regulatory protein RecX
	RHA1_ro06765	recA	Recombinase A
	RHA1_ro06766	recX	Regulatory protein RecX
Position: -8 Score: 5.3 Sequence: GCGAACATATGTTCGT Locus tag: RHA1_ro01383 Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7)
	RHA1_ro01383	dinB	DNA polymerase IV (EC 2.7.7.7)
Position: -64 Score: 5.1 Sequence: TCGAAAATACGTTCGA Locus tag: RHA1_ro06212 Name: nfa9050 Funciton: Recombinase-like hypothetical protein Locus tag: RHA1_ro06213 Name: COG0389 Funciton: DNA polymerase-like protein PA0670
	RHA1_ro06212	nfa9050	Recombinase-like hypothetical protein
	RHA1_ro06213	COG0389	DNA polymerase-like protein PA0670
Position: -36 Score: 4.8 Sequence: GTGAACATACGTTCGA Locus tag: RHA1_ro04932 Name: alkB Funciton: DNA repair system specific for alkylated DNA
	RHA1_ro04932	alkB	DNA repair system specific for alkylated DNA

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD