Regulon of LexA in Rhodococcus erythropolis PR4
| Regulator type: | Transcription factor |
| TF locus tag: | RER_53970, RER_27760 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Nocardiaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -99
Score: 5.6 Sequence: TCGAACATCAGTTCGA
Locus tag: RER_19790
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -202
Score: 5.6 Sequence: TCGAACAGATGTTTGA
Locus tag: RER_27760
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -35
Score: 5.6 Sequence: TCGAACAGCTGTTCGG
Locus tag: RER_29230
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RER_29240
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: RER_29250
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -57
Score: 5.5 Sequence: TCGAACATATGTGCGA
Locus tag: pREC1_0098
Name: nfa9050 Funciton: Recombinase-like hypothetical protein |
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nfa9050
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Recombinase-like hypothetical protein
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Position: -24
Score: 5.3 Sequence: TCGAACCTGTGTTCGA
Locus tag: pREL1_0107
Name: nfa9050 Funciton: Recombinase-like hypothetical protein |
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nfa9050
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Recombinase-like hypothetical protein
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Position: -254
Score: 5.4 Sequence: TCGAACACGTGTTCGT
Locus tag: RER_27530
Name: recA Funciton: Recombinase A
Locus tag: RER_27540
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -8
Score: 4.9 Sequence: GGGAACATATGTTCGT
Locus tag: RER_37190
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -28
Score: 5.3 Sequence: GGGAACATATGTTCGA
Locus tag: RER_46860
Name: alkB Funciton: DNA repair system specific for alkylated DNA |
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alkB
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DNA repair system specific for alkylated DNA
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |