Regulon of LexA in Rhodococcus erythropolis PR4

Properties
Regulator type:	Transcription factor
TF locus tag:	RER_53970, RER_27760
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Nocardiaceae
Statistics of regulated genes:
- Genes	11
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Nocardiaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -99 Score: 5.6 Sequence: TCGAACATCAGTTCGA Locus tag: RER_19790 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	RER_19790	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -202 Score: 5.6 Sequence: TCGAACAGATGTTTGA Locus tag: RER_27760 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	RER_27760	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -35 Score: 5.6 Sequence: TCGAACAGCTGTTCGG Locus tag: RER_29230 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: RER_29240 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: RER_29250 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	RER_29230	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	RER_29240	ruvA	Holliday junction DNA helicase RuvA
	RER_29250	ruvB	Holliday junction DNA helicase RuvB
Position: -57 Score: 5.5 Sequence: TCGAACATATGTGCGA Locus tag: pREC1_0098 Name: nfa9050 Funciton: Recombinase-like hypothetical protein
	pREC1_0098	nfa9050	Recombinase-like hypothetical protein
Position: -24 Score: 5.3 Sequence: TCGAACCTGTGTTCGA Locus tag: pREL1_0107 Name: nfa9050 Funciton: Recombinase-like hypothetical protein
	pREL1_0107	nfa9050	Recombinase-like hypothetical protein
Position: -254 Score: 5.4 Sequence: TCGAACACGTGTTCGT Locus tag: RER_27530 Name: recA Funciton: Recombinase A Locus tag: RER_27540 Name: recX Funciton: Regulatory protein RecX
	RER_27530	recA	Recombinase A
	RER_27540	recX	Regulatory protein RecX
Position: -8 Score: 4.9 Sequence: GGGAACATATGTTCGT Locus tag: RER_37190 Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7)
	RER_37190	dinB	DNA polymerase IV (EC 2.7.7.7)
Position: -28 Score: 5.3 Sequence: GGGAACATATGTTCGA Locus tag: RER_46860 Name: alkB Funciton: DNA repair system specific for alkylated DNA
	RER_46860	alkB	DNA repair system specific for alkylated DNA

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD