Regulon of NrdR in Shewanella sediminis HAW-EB3

Properties
Regulator type:	Transcription factor
TF locus tag:	Ssed_1272
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Regulog:	NrdR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 64 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NrdR
By TF family - NrdR
By effector - Deoxyribonucleotides
By pathway - Deoxyribonucleotide biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -164 Score: 5.2 Sequence: ACACCATATATAGTGT Position: -162 Score: 4.2 Sequence: ACCATATATAGTGTGT Locus tag: Ssed_2306 Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Locus tag: Ssed_2307 Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Locus tag: Ssed_2308 Name: SO2417 Funciton: Ferredoxin
	Ssed_2306	nrdA	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
	Ssed_2307	nrdB	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
	Ssed_2308	SO2417	Ferredoxin
Position: -80 Score: 4.2 Sequence: ACGCAACATATTGTGC Position: -49 Score: 5.1 Sequence: ACACTATATGTGGTGT Locus tag: Ssed_1600 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: Ssed_1601 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	Ssed_1600	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	Ssed_1601	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD