Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NrdR in Shewanella sediminis HAW-EB3

Properties
Regulator type: Transcription factor
TF locus tag: Ssed_1272
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Regulog: NrdR - Shewanellaceae
Statistics of regulated genes:
- Genes 5
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 64 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -164
Score: 5.2
Sequence: ACACCATATATAGTGT
Position: -162
Score: 4.2
Sequence: ACCATATATAGTGTGT
Locus tag: Ssed_2306
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Ssed_2307
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Ssed_2308
Name: SO2417
Funciton: Ferredoxin
nrdA
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdB
Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
SO2417
Ferredoxin

Position: -80
Score: 4.2
Sequence: ACGCAACATATTGTGC
Position: -49
Score: 5.1
Sequence: ACACTATATGTGGTGT
Locus tag: Ssed_1600
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Ssed_1601
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD