Regulon of NrdR in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_1186
Regulator family:	NrdR
Regulation mode:	repressor
Biological process:	Deoxyribonucleotide biosynthesis
Effector:	Deoxyribonucleotides
Regulog:	NrdR - Shewanellaceae
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 64 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NrdR
By TF family - NrdR
By effector - Deoxyribonucleotides
By pathway - Deoxyribonucleotide biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 3.7 Sequence: CCTCACTATCTTGTAT Position: -149 Score: 5 Sequence: ACACCATATCTTGTGT Locus tag: Shew_1946 Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Locus tag: Shew_1945 Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) Locus tag: Shew_1944 Name: SO2417 Funciton: Ferredoxin
	Shew_1946	nrdA	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
	Shew_1945	nrdB	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
	Shew_1944	SO2417	Ferredoxin
Position: -80 Score: 4.3 Sequence: GCGCTACATATTGTGT Position: -49 Score: 5.2 Sequence: ACACTATATATGGTGT Locus tag: Shew_2449 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: Shew_2448 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	Shew_2449	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	Shew_2448	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD