Regulon of NorR in Shewanella woodyi ATCC 51908
| Regulator type: | Transcription factor |
| TF locus tag: | Swoo_0688, Swoo_0760 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Regulog: | NorR - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - NorR
- By TF family - Fis
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -199
Score: 4 Sequence: ATCAGTCATATTGATATTC
Position: -172
Score: 4.9 Sequence: AGCTGTCATTTAGACACTA
Position: -154
Score: 5.1 Sequence: AACTGTCATTTTTACAATA
Position: -130
Score: 5 Sequence: CATAGTCATAATGACACAT
Locus tag: Swoo_0761
Name: norB Funciton: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent |
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norB
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Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
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Position: -62
Score: 5.2 Sequence: GATTGTCAAAATGACATAC
Position: -37
Score: 4.1 Sequence: TATGGTCATATTCAAACCA
Locus tag: Swoo_0760
Name: norR Funciton: anaerobic nitric oxide reductase transcription regulator, Fis family |
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norR
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anaerobic nitric oxide reductase transcription regulator, Fis family
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Position: -525
Score: 5.5 Sequence: TAGAGTCAATATGACTACA
Position: -499
Score: 4.9 Sequence: TGTAGTCATATTGACTCAC
Locus tag: Swoo_0686
Name: nnrS2 Funciton: NnrS protein involved in response to NO
Locus tag: Swoo_0685
Name: hmp2 Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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nnrS2
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NnrS protein involved in response to NO
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hmp2
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Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
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Position: -118
Score: 4.9 Sequence: GTGAGTCAATATGACTACA
Position: -92
Score: 5.5 Sequence: TGTAGTCATATTGACTCTA
Locus tag: Swoo_0688
Name: norR2 Funciton: anaerobic nitric oxide reductase transcription regulator, Fis family |
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norR2
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anaerobic nitric oxide reductase transcription regulator, Fis family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |