Profile of regulator NorR in Shewanellaceae
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Regulog: | NorR - Shewanellaceae |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - NorR
- By TF family - Fis
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Shewanella putrefaciens CN-32 | |||||
| Sputcn32_3073 | norR | -50 | 4.6 | CTGTGTCAATATCACAATT | |
| Sputcn32_3072 | norB | -120 | 4.1 | ACGTATCAAAAAGACACTC | |
| Sputcn32_3072 | norB | -144 | 5.7 | AATTGTCATTATGACACTT | |
| Sputcn32_3072 | norB | -162 | 4.9 | TAGTGTCATAAAAACAATA | |
| Sputcn32_3072 | norB | -190 | 3.9 | GATTGTTTTAAAGACACAA | |
| Shewanella sp W3-18-1 | |||||
| Sputw3181_0872 | norR | -50 | 4.6 | CTGTGTCAATATCACAATT | |
| Sputw3181_0873 | norB | -120 | 4.1 | ACGTATCAAAAAGACACTC | |
| Sputw3181_0873 | norB | -144 | 5.7 | AATTGTCATTATGACACTT | |
| Sputw3181_0873 | norB | -190 | 3.9 | GATTGTTTTAAAGACACAA | |
| Sputw3181_0873 | norB | -162 | 4.9 | TAGTGTCATAAAAACAATA | |
| Shewanella sp ANA-3 | |||||
| Shewana3_0845 | norR | -166 | 3.7 | AGGTGTCGTTTAGGCACCT | |
| Shewana3_0845 | norR | -58 | 4.6 | CTGTGTCAATATAACAATC | |
| Shewana3_0846 | norB | -131 | 4.6 | CAGTATCAAAAAGACAATC | |
| Shewana3_0846 | norB | -156 | 4.5 | CACTGTCATATCAACAATC | |
| Shewana3_0846 | norB | -174 | 4.9 | AGCTGTCATAAAGACAATC | |
| Shewana3_0846 | norB | -203 | 3.6 | CATTGTGTTATCGACATAC | |
| Shewanella sp MR-4 | |||||
| Shewmr4_3090 | norR | -167 | 3.7 | AGGTGTCGTTTAGGCACCT | |
| Shewmr4_3090 | norR | -58 | 4.6 | CTGTGTCAATATAACAATC | |
| Shewmr4_3089 | norB | -156 | 5.4 | AACTGTCATATCGACAATA | |
| Shewmr4_3089 | norB | -131 | 4.6 | CAGTATCAAAAAGACAATT | |
| Shewmr4_3089 | norB | -174 | 4.5 | AGCTGTCACAAAGACAATA | |
| Shewmr4_3089 | norB | -203 | 4 | CATTGTGTTATCGACATTC | |
| Shewmr4_3089 | norB | -33 | 3.6 | ACGTATCAAAATGACGTTG | |
| Shewanella sp MR-7 | |||||
| Shewmr7_0883 | norB | -203 | 4 | CATTGTGTTATCGACATTC | |
| Shewmr7_0883 | norB | -174 | 5 | AGCTGTCATAAAGACAATA | |
| Shewmr7_0883 | norB | -156 | 5 | AGCTGTCATATCGACAACA | |
| Shewmr7_0883 | norB | -131 | 4.7 | CAGTATCAAAAAGACAATA | |
| Shewmr7_0882 | norR | -58 | 4.6 | CTGTGTCAATATAACAATC | |
| Shewmr7_0882 | norR | -166 | 3.7 | AGGTGTCGTTTAGGCACCT | |
| Shewanella frigidimarina NCIMB 400 | |||||
| Sfri_3254 | norR | -58 | 4.4 | TGTTGTTATATTCACACTT | |
| Sfri_3254 | norR | -43 | 5 | ACTTGTCATAATGACATCA | |
| Sfri_1583 | norV | -195 | 4.8 | CAAAGTCATAATGACACCC | |
| Sfri_1583 | norV | -176 | 4.4 | GATAGTCATAAAGACATAG | |
| Sfri_1583 | norV | -152 | 4.9 | AATTGTTATAATGACACCC | |
| Sfri_3253 | norB | -138 | 4.7 | ATGTGTCAATAAGACTATT | |
| Sfri_3253 | norB | -162 | 4.7 | AATAGTCTTATTGACACAT | |
| Sfri_3253 | norB | -181 | 4.7 | CGCTGTCATTTCGACATTA | |
| Shewanella amazonensis SB2B | |||||
| Sama_0728 | norB | -169 | 4.8 | TAGTGTCATTTATACAATT | |
| Sama_0728 | norB | -149 | 4.5 | AAATGTCTTTATGACATCA | |
| Sama_0727 | norR | -76 | 5 | CCATGTCAAAATGACAATT | |
| Shewanella loihica PV-4 | |||||
| Shew_0656 | norR | -120 | 5.3 | AAGTGTAAAAATGACAATA | |
| Shew_0656 | norR | -96 | 4.4 | TACTGTTAAATTGACATAT | |
| Shew_0657 | norB | -132 | 5.9 | GATTGTCATTATGACAATT | |
| Shew_0657 | norB | -157 | 4.6 | CGGTGTCATTTTTACACTT | |
| Shew_0657 | norB | -175 | 4.5 | CACTGTCTTTTTGACACGC | |
| Shew_0657 | norB | -204 | 4.2 | AAGTATCAAATCGACACAG | |
| Shewanella pealeana ATCC 700345 | |||||
| Spea_3444 | norR | -154 | 4.7 | AAGTGTAAAATTGACATTG | |
| Spea_3444 | norR | -119 | 4.1 | TACTGTTAAAAAGACACAC | |
| Spea_3652 | norV | -145 | 3.8 | CGCTATCAAAAAGACAGTG | |
| Spea_3652 | norV | -169 | 4.3 | ATATGTCACTTTGACATTT | |
| Spea_3652 | norV | -188 | 4.6 | AGGTGTCTTATTGACAGCT | |
| Spea_3652 | norV | -237 | 4 | TATAGTCGTTTGGTCACTG | |
| Shewanella halifaxensis HAW-EB4 | |||||
| Shal_3554 | norB | -165 | 4.1 | CGTTATCAAATAGACAGCT | |
| Shal_3554 | norB | -186 | 4.5 | AGATGTCAATTCGACAAAG | |
| Shal_3555 | norR | -86 | 4.3 | TACTGTAAAAAAGACAGCA | |
| Shal_3554 | norB | -142 | 5.3 | CACAGTCAAAATGACAACA | |
| Shal_3740 | norV | -144 | 4 | TGCTATCAAAAAGACATTG | |
| Shal_3740 | norV | -188 | 4.8 | GACTGTCTTAATGACATTT | |
| Shal_3740 | norV | -168 | 4.9 | TACGGTCATTTTGACTGTT | |
| Shewanella piezotolerans WP3 | |||||
| swp_4283 | swp_4283 | -131 | 5.1 | CGTAGTCATTATGACTACA | |
| swp_0832 | norR | -105 | 4.2 | AACAGTATATTTGACACTG | |
| swp_0832 | norR | -72 | 4.9 | TAATGTCAAAAAGACAAAA | |
| swp_4283 | swp_4283 | -156 | 4.8 | ATGAGTCATAATGACTACA | |
| swp_0833 | norB | -173 | 5.2 | CATTGTCAAAAAGACACTT | |
| swp_0833 | norB | -155 | 4.8 | TAGTGTCATATGGACACAC | |
| swp_0833 | norB | -131 | 5.1 | CATTGTCTTTATGACAACC | |
| swp_4282 | norR2 | -118 | 5.1 | TGTAGTCATAATGACTACG | |
| swp_4282 | norR2 | -93 | 4.8 | TGTAGTCATTATGACTCAT | |
| swp_1079 | norV | -138 | 5.1 | TGTTGTCATTATTACAATT | |
| swp_1079 | norV | -162 | 4.5 | GAGTGTCTTTATGATACTT | |
| swp_1079 | norV | -182 | 4.2 | GGGTGTCTTAATGACATAG | |
| swp_1079 | norV | -207 | 4 | CTTTGTCATAAAGACTCGG | |
| Shewanella sediminis HAW-EB3 | |||||
| Ssed_3822 | norB | -129 | 4.5 | GGGTGTCCTAATGACACAA | |
| Ssed_3822 | norB | -171 | 4.9 | AAGTGTAAAAATGACACTG | |
| Ssed_3822 | norB | -153 | 4.3 | GGCTGTTATTAAGACACTA | |
| Ssed_3823 | norR | -136 | 5.2 | AAATGTCAATATGACAAGC | |
| Ssed_3823 | norR | -160 | 4.1 | TTTTGTATTTATGACAGCA | |
| Ssed_4053 | norV | -133 | 4 | GCATGTCTTTATGACATCT | |
| Ssed_4053 | norV | -157 | 4.1 | CAATGTCTTTTGGACAGTT | |
| Ssed_4053 | norV | -176 | 4.6 | TAGTGTTGATATGACACTG | |
| Ssed_4053 | norV | -213 | 4.1 | TCCTGTTATTAAGACACTC | |
| Shewanella woodyi ATCC 51908 | |||||
| Swoo_0760 | norR | -62 | 5.2 | GATTGTCAAAATGACATAC | |
| Swoo_0760 | norR | -37 | 4.1 | TATGGTCATATTCAAACCA | |
| Swoo_0686 | nnrS2 | -525 | 5.5 | TAGAGTCAATATGACTACA | |
| Swoo_0686 | nnrS2 | -499 | 4.9 | TGTAGTCATATTGACTCAC | |
| Swoo_0688 | norR2 | -118 | 4.9 | GTGAGTCAATATGACTACA | |
| Swoo_0688 | norR2 | -92 | 5.5 | TGTAGTCATATTGACTCTA | |
| Swoo_0761 | norB | -130 | 5 | CATAGTCATAATGACACAT | |
| Swoo_0761 | norB | -154 | 5.1 | AACTGTCATTTTTACAATA | |
| Swoo_0761 | norB | -172 | 4.9 | AGCTGTCATTTAGACACTA | |
| Swoo_0761 | norB | -199 | 4 | ATCAGTCATATTGATATTC | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |