Regulon of NagR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shal_1144
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Shewanellaceae
Statistics of regulated genes:
- Genes	9
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 105 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -78 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: Shal_1145 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Shal_1146 Name: trpX Funciton: Tryptophan halogenase
	Shal_1145	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Shal_1146	trpX	Tryptophan halogenase
Position: -344 Score: 6.1 Sequence: CATGACAGCGTTGTCATC Locus tag: Shal_1148 Name: hex Funciton: Beta-hexosaminidase (EC 3.2.1.52)
	Shal_1148	hex	Beta-hexosaminidase (EC 3.2.1.52)
Position: -149 Score: 6.1 Sequence: ATTGACAACGTTGTCACT Locus tag: Shal_1147 Name: sapC Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
	Shal_1147	sapC	Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Position: -199 Score: 6.1 Sequence: AATGACAGCGTTGTCTTT Locus tag: Shal_1152 Name: nagP Funciton: N-acetylglucosamine transporter, NagP
	Shal_1152	nagP	N-acetylglucosamine transporter, NagP
Position: -84 Score: 6.4 Sequence: AATGACAGCGTTGTCATT Locus tag: Shal_0813 Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
	Shal_0813	nagB	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -124 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Shal_1149 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Shal_1150 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: Shal_1151 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Shal_1149	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Shal_1150	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Shal_1151	nagX	N-acetylglucosamine related transporter, NagX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD