Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NagR in Shewanellaceae

Properties
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_0854 SO0854 -83 5.7 CATGACAACGTTGTCAAA
SO_3510 mcp_nag -437 5 ACTGACAGCGTTGTTATA
SO_3510 mcp_nag -290 6.4 AATGACAACGCTGTCATC
SO_3514 omp_nag -74 6.2 CATGACAGCGTTGTCATT
SO_1072 cbp -304 5.6 TTTGACAACGTTGTCTTT
SO_3503 nagP -175 6.1 AATGACAGCGTTGTCTTT
SO_3507 nagK -115 6.4 AATGACAACGCTGTCATT
Shewanella putrefaciens CN-32
Sputcn32_1074 omp_nag -75 6.2 CATGACAGCGTTGTCATT
Sputcn32_1080 nagP -179 6.1 AATGACAGCGTTGTCTTT
Sputcn32_1076 nagK -90 6.4 AATGACAACGCTGTCATC
Shewanella sp W3-18-1
Sputw3181_3084 nagP -179 6.1 AATGACAGCGTTGTCTTT
Sputw3181_3089 nagK -90 6.4 AATGACAACGCTGTCATC
Sputw3181_3091 omp_nag -75 6.2 CATGACAGCGTTGTCATT
Shewanella sp ANA-3
Shewana3_3122 nagR -96 5.1 GCTGACAACGCTGTCGGC
Shewana3_2984 chiA -214 6.6 AATGACAACGTTGTCATT
Shewana3_3424 SO0854 -91 5.4 TATGACAACGTTGTCAAA
Shewana3_3121 omp_nag -74 6.2 CATGACAGCGTTGTCATT
Shewana3_3110 nagP -177 6.1 AATGACAGCGTTGTCTTT
Shewana3_3114 nagK -114 6.4 AATGACAACGCTGTCATT
Shewana3_3117 pilM -294 6.4 AATGACAACGCTGTCATC
Shewana3_3118 duf81 -66 5.2 TGTGACAACGCTGTCTTT
Shewanella sp MR-4
Shewmr4_0710 SO0854 -91 5.4 TATGACAACGTTGTCAAA
Shewmr4_2938 pilM -294 6.4 AATGACAACGCTGTCATC
Shewmr4_2943 nagR -96 5.1 GCTGACAACGCTGTCGGC
Shewmr4_2805 chiA -212 6.6 AATGACAACGTTGTCATT
Shewmr4_2939 duf81 -68 5 TGTGACAACGCTGTCCTT
Shewmr4_2942 omp_nag -74 6.2 CATGACAGCGTTGTCATT
Shewmr4_3027 cbp -300 5.4 TTTGACAACGCTGTCTTT
Shewmr4_2931 nagP -178 6.1 AATGACAGCGTTGTCTTT
Shewmr4_2935 nagK -114 6.4 AATGACAACGCTGTCATT
Shewanella sp MR-7
Shewmr7_3312 SO0854 -91 5.4 TATGACAACGTTGTCAAA
Shewmr7_3025 nagR -96 5.1 GCTGACAACGCTGTCGGC
Shewmr7_3021 duf81 -68 5.2 TGTGACAACGCTGTCTTT
Shewmr7_3020 pilM -294 6.4 AATGACAACGCTGTCATC
Shewmr7_3024 omp_nag -348 5.1 GCCGACAGCGTTGTCAGC
Shewmr7_3024 omp_nag -74 6.2 CATGACAGCGTTGTCATT
Shewmr7_2888 chiA -212 6.6 AATGACAACGTTGTCATT
Shewmr7_0947 cbp -300 5.2 TTTGACAGCGCTGTCTTT
Shewmr7_3013 nagP -178 6.1 AATGACAGCGTTGTCTTT
Shewmr7_3017 nagK -114 6.4 AATGACAACGCTGTCATT
Shewanella baltica OS155
Sbal_1080 duf81 -210 6.4 GATGACAGCGTTGTCATT
Sbal_1080 duf81 -64 5.4 TGTGACAACGTTGTCTTT
Sbal_1081 pilM -304 6.4 AATGACAACGCTGTCATC
Sbal_2491 cdxA 573 5.9 AATGACAGCGCTGTCACT
Sbal_3083 chiA -221 6.6 AATGACAACGTTGTCATT
Sbal_0896 cbp -309 5.4 TTTGACAGCGTTGTCTTT
Sbal_1088 nagP -179 6.1 AATGACAGCGTTGTCTTT
Sbal_1084 nagK -113 6.4 AATGACAACGCTGTCATT
Shewanella denitrificans OS217
Sden_2709 nagR -301 6.2 AATGACAACGCTGTCATG
Sden_2136 chiA -212 6.4 AATGACAACGCTGTCATT
Sden_2708 omp_nag -76 6.2 CATGACAGCGTTGTCATT
Sden_1030 cbp -183 5.2 TTTGACAGCGCTGTCTTT
Sden_2702 nagP -138 5.6 AATGACAGCGTTGTCTTA
Sden_2706 nagK -101 6.4 AATGACAACGCTGTCATT
Sden_0553 hex -243 6 ATTGACAACGCTGTCAAT
Shewanella amazonensis SB2B
Sama_0941 pilM -282 6.4 AATGACAGCGTTGTCATT
Sama_0948 nagP -167 6.1 AATGACAGCGTTGTCTTT
Sama_0944 nagK -105 6.4 AATGACAACGCTGTCATT
Sama_0938 omp_nag -75 6.2 CATGACAGCGTTGTCATT
Shewanella loihica PV-4
Shew_0815 nagB -119 6.4 AATGACAACGCTGTCATT
Shew_1119 nagP -186 6.1 AATGACAGCGTTGTCTTT
Shew_1116 nagK -106 6.4 AATGACAGCGTTGTCATT
Shew_1114 sapC -374 5.7 TATGACAACGCTGTCAAC
Shew_1112 omp_nag -76 6.2 CATGACAGCGTTGTCATT
Shewanella pealeana ATCC 700345
Spea_1099 sapC -117 6.1 ATTGACAACGTTGTCACT
Spea_1097 omp_nag -77 6.2 CATGACAGCGTTGTCATT
Spea_1100 hex -334 6.4 AATGACAGCGTTGTCATC
Spea_3159 cbp2 -39 5.7 TTTGACAGCGTTGTCATT
Spea_0760 nagB -182 6.4 AATGACAGCGTTGTCATT
Spea_1104 nagP -198 6.1 AATGACAGCGTTGTCTTT
Spea_1101 nagK -123 6.4 AATGACAACGCTGTCATT
Shewanella halifaxensis HAW-EB4
Shal_1148 hex -344 6.1 CATGACAGCGTTGTCATC
Shal_1145 omp_nag -78 6.2 CATGACAGCGTTGTCATT
Shal_1147 sapC -149 6.1 ATTGACAACGTTGTCACT
Shal_0813 nagB -84 6.4 AATGACAGCGTTGTCATT
Shal_1152 nagP -199 6.1 AATGACAGCGTTGTCTTT
Shal_1149 nagK -124 6.4 AATGACAACGCTGTCATT
Shewanella piezotolerans WP3
swp_4634 SO0852 -164 5.3 AATGACATCGCTGTCACA
swp_0647 chiA -249 6.4 AATGACAACGCTGTCATT
swp_3708 duf81 -129 5.4 AATGACAACGCTGTCTAA
swp_3712 omp_nag -77 6.2 CATGACAGCGTTGTCATT
swp_3707 pilM -277 5.9 TATGACAGCGTTGTCATC
swp_3933 cbp2 -40 5.9 TATGACAGCGTTGTCATT
swp_2992 chiA3 -182 5.2 TGTGACAGCGCTGTCAAT
swp_4289 nagB -91 6.4 AATGACAGCGTTGTCATT
swp_3698 nagP -177 6.1 AATGACAGCGTTGTCTTT
swp_3703 nagK -106 6.4 AATGACAACGCTGTCATT
Shewanella sediminis HAW-EB3
Ssed_1211 hex -572 6.4 AATGACAGCGTTGTCATC
Ssed_0844 nagB -84 6.4 AATGACAGCGTTGTCATT
Ssed_1215 nagP -168 6.1 AATGACAGCGTTGTCTTT
Ssed_1212 nagK -106 6.4 AATGACAACGCTGTCATT
Ssed_1208 omp_nag -78 6.2 CATGACAGCGTTGTCATT
Ssed_1210 sapC -293 6.4 GATGACAACGCTGTCATT
Ssed_1210 sapC -139 5.2 TATGACAACGCTGTCAAA
Shewanella woodyi ATCC 51908
Swoo_1100 chiA -306 6.4 GATGACAGCGTTGTCATC
Swoo_1305 omp_nag -34 6.2 CATGACAGCGTTGTCATT
Swoo_1309 pilM -311 6.4 AATGACAGCGTTGTCATC
Swoo_2719 cdxA 567 6.1 AATGACAGCGTTGTCACC
Swoo_4312 pdaA -99 5.6 AATGACAGCGTTGTCTTA
Swoo_3939 omp_nag2 -36 5.9 TATGACAGCGTTGTCATT
Swoo_3879 cbp -311 5.9 ATTGACAGCGTTATCATT
Swoo_0943 nagB -190 6.4 AATGACAGCGTTGTCATT
Swoo_1315 nagP -172 6.1 AATGACAGCGTTGTCTTT
Swoo_1312 nagK -108 6.4 AATGACAACGCTGTCATT
Swoo_1308 duf81 -92 5.7 TATGACAACGCTGTCAAT
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