Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagR in Shewanella piezotolerans WP3

Properties
Regulator type: Transcription factor
TF locus tag: swp_3713
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagR - Shewanellaceae
Statistics of regulated genes:
- Genes 19
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 105 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -164
Score: 5.3
Sequence: AATGACATCGCTGTCACA
Locus tag: swp_4634
Name: SO0852
Funciton: Type IV fimbrial biogenesis protein PilV
Locus tag: swp_4633
Name: SO0851
Funciton: prepilin-type cleavage/methylation-like protein
Locus tag: swp_4632
Name: SO0850
Funciton: Type IV fimbrial biogenesis protein PilX
swp_4634
SO0852
Type IV fimbrial biogenesis protein PilV
swp_4633
SO0851
prepilin-type cleavage/methylation-like protein
swp_4632
SO0850
Type IV fimbrial biogenesis protein PilX
Position: -249
Score: 6.4
Sequence: AATGACAACGCTGTCATT
Locus tag: swp_0647
Name: chiA
Funciton: Chitinase (EC 3.2.1.14)
swp_0647
chiA
Chitinase (EC 3.2.1.14)
Position: -77
Score: 6.2
Sequence: CATGACAGCGTTGTCATT
Locus tag: swp_3712
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: swp_3711
Name: trpX
Funciton: Tryptophan halogenase
swp_3712
omp_nag
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
swp_3711
trpX
Tryptophan halogenase
Position: -129
Score: 5.4
Sequence: AATGACAACGCTGTCTAA
Locus tag: swp_3708
Name: duf81
Funciton: protein of unknown function DUF81
Locus tag: swp_3709
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Locus tag: swp_3710
Name: trpX
Funciton: Tryptophan halogenase
swp_3708
duf81
protein of unknown function DUF81
swp_3709
sapC
Peptide transport system permease protein sapC (TC 3.A.1.5.5)
swp_3710
trpX
Tryptophan halogenase
Position: -40
Score: 5.9
Sequence: TATGACAGCGTTGTCATT
Locus tag: swp_3933
Name: cbp2
Funciton: putative chitn-binding protein, exported
swp_3933
cbp2
putative chitn-binding protein, exported
Position: -182
Score: 5.2
Sequence: TGTGACAGCGCTGTCAAT
Locus tag: swp_2992
Name: chiA3
Funciton: chitodextrinase
swp_2992
chiA3
chitodextrinase
Position: -277
Score: 5.9
Sequence: TATGACAGCGTTGTCATC
Locus tag: swp_3707
Name: pilM
Funciton: homolog of type IV pilus assembly protein PilM
Locus tag: swp_3706
Name: mcp_nag
Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein
Locus tag: swp_3705
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
swp_3707
pilM
homolog of type IV pilus assembly protein PilM
swp_3706
mcp_nag
N-acetylglucosamine regulated methyl-accepting chemotaxis protein
swp_3705
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -177
Score: 6.1
Sequence: AATGACAGCGTTGTCTTT
Locus tag: swp_3698
Name: nagP
Funciton: N-acetylglucosamine transporter, NagP
swp_3698
nagP
N-acetylglucosamine transporter, NagP
Position: -91
Score: 6.4
Sequence: AATGACAGCGTTGTCATT
Locus tag: swp_4289
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
swp_4289
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -106
Score: 6.4
Sequence: AATGACAACGCTGTCATT
Locus tag: swp_3703
Name: nagK
Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Locus tag: swp_3701
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: swp_3700
Name: nagX
Funciton: N-acetylglucosamine related transporter, NagX
swp_3703
nagK
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
swp_3701
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
swp_3700
nagX
N-acetylglucosamine related transporter, NagX
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