Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NagR in Shewanella sediminis HAW-EB3

Properties
Regulator type: Transcription factor
TF locus tag: Ssed_1207
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Regulog: NagR - Shewanellaceae
Statistics of regulated genes:
- Genes 9
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 105 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -572
Score: 6.4
Sequence: AATGACAGCGTTGTCATC
Locus tag: Ssed_1211
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
hex
Beta-hexosaminidase (EC 3.2.1.52)

Position: -78
Score: 6.2
Sequence: CATGACAGCGTTGTCATT
Locus tag: Ssed_1208
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Ssed_1209
Name: trpX
Funciton: Tryptophan halogenase
omp_nag
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
trpX
Tryptophan halogenase

Position: -293
Score: 6.4
Sequence: GATGACAACGCTGTCATT
Position: -139
Score: 5.2
Sequence: TATGACAACGCTGTCAAA
Locus tag: Ssed_1210
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
sapC
Peptide transport system permease protein sapC (TC 3.A.1.5.5)

Position: -168
Score: 6.1
Sequence: AATGACAGCGTTGTCTTT
Locus tag: Ssed_1215
Name: nagP
Funciton: N-acetylglucosamine transporter, NagP
nagP
N-acetylglucosamine transporter, NagP

Position: -84
Score: 6.4
Sequence: AATGACAGCGTTGTCATT
Locus tag: Ssed_0844
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

Position: -106
Score: 6.4
Sequence: AATGACAACGCTGTCATT
Locus tag: Ssed_1212
Name: nagK
Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Locus tag: Ssed_1213
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: Ssed_1214
Name: nagX
Funciton: N-acetylglucosamine related transporter, NagX
nagK
N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagX
N-acetylglucosamine related transporter, NagX
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD