Regulon of NagR in Shewanella loihica PV-4

Properties
Regulator type:	Transcription factor
TF locus tag:	Shew_1111
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 105 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -76 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: Shew_1112 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Shew_1113 Name: trpX Funciton: Tryptophan halogenase
	Shew_1112	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Shew_1113	trpX	Tryptophan halogenase
Position: -374 Score: 5.7 Sequence: TATGACAACGCTGTCAAC Locus tag: Shew_1114 Name: sapC Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
	Shew_1114	sapC	Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Position: -186 Score: 6.1 Sequence: AATGACAGCGTTGTCTTT Locus tag: Shew_1119 Name: nagP Funciton: N-acetylglucosamine transporter, NagP
	Shew_1119	nagP	N-acetylglucosamine transporter, NagP
Position: -119 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Shew_0815 Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
	Shew_0815	nagB	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Position: -106 Score: 6.4 Sequence: AATGACAGCGTTGTCATT Locus tag: Shew_1116 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Shew_1117 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: Shew_1118 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Shew_1116	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Shew_1117	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Shew_1118	nagX	N-acetylglucosamine related transporter, NagX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD