Regulon of NagR in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_0937
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Shewanellaceae
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 105 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -75 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: Sama_0938 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Sama_0939 Name: trpX Funciton: Tryptophan halogenase
	Sama_0938	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Sama_0939	trpX	Tryptophan halogenase
Position: -167 Score: 6.1 Sequence: AATGACAGCGTTGTCTTT Locus tag: Sama_0948 Name: nagP Funciton: N-acetylglucosamine transporter, NagP
	Sama_0948	nagP	N-acetylglucosamine transporter, NagP
Position: -282 Score: 6.4 Sequence: AATGACAGCGTTGTCATT Locus tag: Sama_0941 Name: pilM Funciton: homolog of type IV pilus assembly protein PilM Locus tag: Sama_0942 Name: mcp_nag Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein Locus tag: Sama_0943 Name: hex Funciton: Beta-hexosaminidase (EC 3.2.1.52)
	Sama_0941	pilM	homolog of type IV pilus assembly protein PilM
	Sama_0942	mcp_nag	N-acetylglucosamine regulated methyl-accepting chemotaxis protein
	Sama_0943	hex	Beta-hexosaminidase (EC 3.2.1.52)
Position: -105 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Sama_0944 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Sama_0945 Name: nagB2 Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Locus tag: Sama_0946 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: Sama_0947 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Sama_0944	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Sama_0945	nagB2	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
	Sama_0946	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Sama_0947	nagX	N-acetylglucosamine related transporter, NagX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD