Regulon of NagR in Shewanella denitrificans OS217

Properties
Regulator type:	Transcription factor
TF locus tag:	Sden_2709
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 105 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -212 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Sden_2136 Name: chiA Funciton: Chitinase (EC 3.2.1.14)
	Sden_2136	chiA	Chitinase (EC 3.2.1.14)
Position: -243 Score: 6 Sequence: ATTGACAACGCTGTCAAT Locus tag: Sden_0553 Name: hex Funciton: Beta-hexosaminidase (EC 3.2.1.52)
	Sden_0553	hex	Beta-hexosaminidase (EC 3.2.1.52)
Position: -76 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: Sden_2708 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Sden_2707 Name: trpX Funciton: Tryptophan halogenase
	Sden_2708	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Sden_2707	trpX	Tryptophan halogenase
Position: -183 Score: 5.2 Sequence: TTTGACAGCGCTGTCTTT Locus tag: Sden_1030 Name: cbp Funciton: Chitn and N-acetylglucosamine-binding protein A
	Sden_1030	cbp	Chitn and N-acetylglucosamine-binding protein A
Position: -301 Score: 6.2 Sequence: AATGACAACGCTGTCATG Locus tag: Sden_2709 Name: nagR Funciton: Transcriptional regulator of N-acetylglucosamine utilization, LacI family
	Sden_2709	nagR	Transcriptional regulator of N-acetylglucosamine utilization, LacI family
Position: -138 Score: 5.6 Sequence: AATGACAGCGTTGTCTTA Locus tag: Sden_2702 Name: nagP Funciton: N-acetylglucosamine transporter, NagP
	Sden_2702	nagP	N-acetylglucosamine transporter, NagP
Position: -101 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Sden_2706 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Sden_2705 Name: nagB2 Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Locus tag: Sden_2704 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: Sden_2703 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Sden_2706	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Sden_2705	nagB2	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
	Sden_2704	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Sden_2703	nagX	N-acetylglucosamine related transporter, NagX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD