Regulon of NagR in Shewanella sp ANA-3

Properties
Regulator type:	Transcription factor
TF locus tag:	Shewana3_3122
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	N-acetylglucosamine
Regulog:	NagR - Shewanellaceae
Statistics of regulated genes:
- Genes	19
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 105 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - NagR
By TF family - LacI
By effector - N-acetylglucosamine
By pathway - N-acetylglucosamine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -91 Score: 5.4 Sequence: TATGACAACGTTGTCAAA Locus tag: Shewana3_3424 Name: SO0854 Funciton: Type IV pilus biogenesis protein PilE Locus tag: Shewana3_3425 Name: SO0853 Funciton: Type IV fimbrial biogenesis protein FimT Locus tag: Shewana3_3426 Name: SO0852 Funciton: Type IV fimbrial biogenesis protein PilV Locus tag: Shewana3_3427 Name: SO0851 Funciton: prepilin-type cleavage/methylation-like protein Locus tag: Shewana3_3428 Name: SO0850 Funciton: Type IV fimbrial biogenesis protein PilX
	Shewana3_3424	SO0854	Type IV pilus biogenesis protein PilE
	Shewana3_3425	SO0853	Type IV fimbrial biogenesis protein FimT
	Shewana3_3426	SO0852	Type IV fimbrial biogenesis protein PilV
	Shewana3_3427	SO0851	prepilin-type cleavage/methylation-like protein
	Shewana3_3428	SO0850	Type IV fimbrial biogenesis protein PilX
Position: -214 Score: 6.6 Sequence: AATGACAACGTTGTCATT Locus tag: Shewana3_2984 Name: chiA Funciton: Chitinase (EC 3.2.1.14)
	Shewana3_2984	chiA	Chitinase (EC 3.2.1.14)
Position: -66 Score: 5.2 Sequence: TGTGACAACGCTGTCTTT Locus tag: Shewana3_3118 Name: duf81 Funciton: protein of unknown function DUF81
	Shewana3_3118	duf81	protein of unknown function DUF81
Position: -294 Score: 6.4 Sequence: AATGACAACGCTGTCATC Locus tag: Shewana3_3117 Name: pilM Funciton: homolog of type IV pilus assembly protein PilM Locus tag: Shewana3_3116 Name: mcp_nag Funciton: N-acetylglucosamine regulated methyl-accepting chemotaxis protein Locus tag: Shewana3_3115 Name: hex Funciton: Beta-hexosaminidase (EC 3.2.1.52)
	Shewana3_3117	pilM	homolog of type IV pilus assembly protein PilM
	Shewana3_3116	mcp_nag	N-acetylglucosamine regulated methyl-accepting chemotaxis protein
	Shewana3_3115	hex	Beta-hexosaminidase (EC 3.2.1.52)
Position: -96 Score: 5.1 Sequence: GCTGACAACGCTGTCGGC Locus tag: Shewana3_3122 Name: nagR Funciton: Transcriptional regulator of N-acetylglucosamine utilization, LacI family
	Shewana3_3122	nagR	Transcriptional regulator of N-acetylglucosamine utilization, LacI family
Position: -177 Score: 6.1 Sequence: AATGACAGCGTTGTCTTT Locus tag: Shewana3_3110 Name: nagP Funciton: N-acetylglucosamine transporter, NagP
	Shewana3_3110	nagP	N-acetylglucosamine transporter, NagP
Position: -74 Score: 6.2 Sequence: CATGACAGCGTTGTCATT Locus tag: Shewana3_3121 Name: omp_nag Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor Locus tag: Shewana3_3120 Name: trpX Funciton: Tryptophan halogenase Locus tag: Shewana3_3119 Name: sapC Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
	Shewana3_3121	omp_nag	N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
	Shewana3_3120	trpX	Tryptophan halogenase
	Shewana3_3119	sapC	Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Position: -114 Score: 6.4 Sequence: AATGACAACGCTGTCATT Locus tag: Shewana3_3114 Name: nagK Funciton: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) Locus tag: Shewana3_3113 Name: nagB2 Funciton: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) Locus tag: Shewana3_3112 Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) Locus tag: Shewana3_3111 Name: nagX Funciton: N-acetylglucosamine related transporter, NagX
	Shewana3_3114	nagK	N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
	Shewana3_3113	nagB2	Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6)
	Shewana3_3112	nagA	N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
	Shewana3_3111	nagX	N-acetylglucosamine related transporter, NagX

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NagR in Shewanella sp ANA-3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --