Regulon of PdxR3 in Streptomyces griseus subsp. griseus NBRC 13350
| Regulator type: | Transcription factor |
| TF locus tag: | SGR_6115, SGR_4328 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Regulog: | PdxR3 - Streptomycetaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptomycetaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -95
Score: 5 Sequence: AGTCCACCTTCCTCGAATTGGCCA
Locus tag: SGR_6114
Name: COG2364 Funciton: Predicted membrane protein
Locus tag: SGR_6113
Name: COG0584 Funciton: Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
Locus tag: SGR_6112
Name: COG2270 Funciton: Permeases of the major facilitator superfamily |
|||
|
COG2364
|
Predicted membrane protein
|
||
|
COG0584
|
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
|
||
|
COG2270
|
Permeases of the major facilitator superfamily
|
||
|
Position: -129
Score: 3.8 Sequence: GGACCAGCGTAGCCAATCTGGCTA
Locus tag: SGR_4327
Name: COG2364 Funciton: Predicted membrane protein |
|||
|
COG2364
|
Predicted membrane protein
|
||
|
Position: -31
Score: 5 Sequence: TGGCCAATTCGAGGAAGGTGGACT
Locus tag: SGR_6115
Name: pdxR3 Funciton: Transcriptional regulator, GntR/MocR family |
|||
|
pdxR3
|
Transcriptional regulator, GntR/MocR family
|
||
|
Position: -25
Score: 3.8 Sequence: TAGCCAGATTGGCTACGCTGGTCC
Locus tag: SGR_4328
Name: pdxR3 Funciton: Transcriptional regulator, GntR/MocR family |
|||
|
pdxR3
|
Transcriptional regulator, GntR/MocR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |