Regulon of MetR in Silicibacter TM1040

Properties
Regulator type:	Transcription factor
TF locus tag:	TM1040_1699
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Rhodobacterales
Statistics of regulated genes:
- Genes	4
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 30 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -48 Score: 4.9 Sequence: GTGAATCAAATTCAT Locus tag: TM1040_1699 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	TM1040_1699	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -91 Score: 4.6 Sequence: GTGAGGCAAGCTCAT Locus tag: TM1040_3617 Name: metH2 Funciton: Methionine synthase I (cobalamin-dependent), methyltransferase domain Locus tag: TM1040_3618 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	TM1040_3617	metH2	Methionine synthase I (cobalamin-dependent), methyltransferase domain
	TM1040_3618	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -124 Score: 4.9 Sequence: ATGAATTTGATTCAC Locus tag: TM1040_1700 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	TM1040_1700	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD