Regulon of MetR in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_3249
Regulator family:	LysR
Regulation mode:
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Comamonadaceae
Statistics of regulated genes:
- Genes	2
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -103 Score: 4.6 Sequence: ATGAATGAATTTCAA Position: -72 Score: 3.4 Sequence: TTTCGTTTGAATCAT Locus tag: Vapar_3248 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Vapar_3248	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -44 Score: 3.4 Sequence: ATGATTCAAACGAAA Position: -13 Score: 4.6 Sequence: TTGAAATTCATTCAT Locus tag: Vapar_3249 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Vapar_3249	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD