Regulon of MetR in Xanthomonas campestris pv. campestris str. ATCC 33913
| Regulator type: | Transcription factor |
| TF locus tag: | XCC0315 |
| Regulator family: | LysR |
| Regulation mode: | repressor |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Xanthomonadales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -19
Score: 5.4 Sequence: ATGAATTCGGATCAT
Locus tag: XCC0315
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Locus tag: XCC0314
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -105
Score: 5.4 Sequence: ATGATCCGAATTCAT
Locus tag: XCC0316
Name: PF03358 Funciton: NADPH-dependent FMN reductase
Locus tag: XCC0317
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: XCC0318
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocy5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)ent isozyme) (cobalamin-independent methionine synthase) |
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PF03358
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NADPH-dependent FMN reductase
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PF08908
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Protein of unknown function DUF1852
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metE
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5-methyltetrahydropteroyltriglutamate--homocy5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)ent isozyme) (cobalamin-independent methionine synthase)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |