Regulon of MetR in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRA1378
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Vibrionales
Statistics of regulated genes:
- Genes	4
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 57 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -212 Score: 5.5 Sequence: ATGAAAATAATTCAT Position: -178 Score: 4.1 Sequence: ATGAATAAATTGTAA Locus tag: PBPRA0795 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	PBPRA0795	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -160 Score: 4.2 Sequence: TTGAAGTTTATGCAA Position: -138 Score: 4.8 Sequence: GTGAAAAAAATTCAT Locus tag: PBPRA0263 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	PBPRA0263	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -226 Score: 4.8 Sequence: ATGAATATATTTAAT Position: -106 Score: 4.3 Sequence: ATTAGTTTTATTCAT Locus tag: PBPRA1379 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	PBPRA1379	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -163 Score: 4.3 Sequence: ATGAATAAAACTAAT Position: -43 Score: 4.8 Sequence: ATTAAATATATTCAT Locus tag: PBPRA1378 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	PBPRA1378	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

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