Regulon of MetR in Vibrio fischeri ES114

Properties
Regulator type:	Transcription factor
TF locus tag:	VF_1722
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Vibrionales
Statistics of regulated genes:
- Genes	5
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 57 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -136 Score: 5 Sequence: ATGAATTATATTCAA Position: -101 Score: 4.1 Sequence: ATCGATTAACTTCAT Locus tag: VF_1722 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	VF_1722	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -222 Score: 4.1 Sequence: ATGCAATTATTTGAA Position: -182 Score: 5.5 Sequence: ATGAATATATTTCAT Locus tag: VF_0695 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	VF_0695	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -134 Score: 4.1 Sequence: ATGAAGTTAATCGAT Position: -99 Score: 5 Sequence: TTGAATATAATTCAT Locus tag: VF_1721 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	VF_1721	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -142 Score: 4.5 Sequence: TTGAGAAAAATTCAT Locus tag: VF_2309 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	VF_2309	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -173 Score: 4.8 Sequence: ATGCATATAATGCAT Position: -151 Score: 4.8 Sequence: ATGAAAAGCATTCAT Locus tag: VF_A0142 Name: pfl Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
	VF_A0142	pfl	Pyruvate formate-lyase (EC 2.3.1.54)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD