Regulon of MetR in Vibrio splendidus LGP32
| Regulator type: | Transcription factor |
| TF locus tag: | VS_1144 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -156
Score: 5.1 Sequence: ATGAAAAAACTGCAT
Position: -143
Score: 4.1 Sequence: ATGATAAAATTGCAA
Locus tag: VS_2373
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Position: -141
Score: 4.8 Sequence: ATTAATAATTTTCAT
Locus tag: VS_1144
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -155
Score: 4.8 Sequence: ATGAAAATTATTAAT
Locus tag: VS_1145
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -193
Score: 4.9 Sequence: ATGAATATTCCTCAT
Locus tag: VS_1283
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: VS_1282
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
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PF08908
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Protein of unknown function DUF1852
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metE2
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Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |