Regulon of MetR in Vibrio shilonii AK1
| Regulator type: | Transcription factor |
| TF locus tag: | VSAK1_00947 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Vibrionales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -157
Score: 4.6 Sequence: ATGAGAAAACTGCAT
Locus tag: VSAK1_10503
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Position: -162
Score: 5.5 Sequence: ATGAAAAAAATTCAT
Locus tag: VSAK1_09463
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -199
Score: 4.7 Sequence: ATGAATATCCCTCAT
Position: -103
Score: 5.1 Sequence: TTGAATTAATTTCAT
Locus tag: VSAK1_00952
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -109
Score: 5.1 Sequence: ATGAAATTAATTCAA
Locus tag: VSAK1_00947
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |