Regulon of MetR in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type:	Transcription factor
TF locus tag:	VIBHAR_02773
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Vibrionales
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 57 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -128 Score: 4.5 Sequence: TTGAGAAAAATTCAT Locus tag: VIBHAR_00047 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	VIBHAR_00047	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -155 Score: 5.1 Sequence: ATGAAAAAACTGCAT Locus tag: VIBHAR_01208 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	VIBHAR_01208	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -133 Score: 4.9 Sequence: ATTAAAAAATTTCAT Locus tag: VIBHAR_02773 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	VIBHAR_02773	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -146 Score: 4.9 Sequence: ATGAAATTTTTTAAT Locus tag: VIBHAR_02772 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	VIBHAR_02772	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -236 Score: 5.2 Sequence: ATGAAATTCCTTCAT Locus tag: VIBHAR_02801 Name: PF08908 Funciton: Protein of unknown function DUF1852 Locus tag: VIBHAR_02800 Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
	VIBHAR_02801	PF08908	Protein of unknown function DUF1852
	VIBHAR_02800	metE2	Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Position: -138 Score: 4.5 Sequence: ATGCAATTTAATCAT Position: -116 Score: 4.8 Sequence: ATGAAAAGCATTCAT Locus tag: VIBHAR_02963 Name: pfl Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
	VIBHAR_02963	pfl	Pyruvate formate-lyase (EC 2.3.1.54)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD