Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HypR in Shewanella frigidimarina NCIMB 400

Properties
Regulator type: Transcription factor
TF locus tag: Sfri_1551
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Regulog: HypR - Shewanellaceae
Statistics of regulated genes:
- Genes 3
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 96 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -138
Score: 5.3
Sequence: ATTGTATACAAT
Locus tag: Sfri_3046
Name: prdP
Funciton: Proline dipeptidase
prdP
Proline dipeptidase

Position: -244
Score: 4
Sequence: ATTGTTTATAAT
Locus tag: Sfri_2628
Name: omp (COG1629)
Funciton: TonB-dependent receptor
omp (COG1629)
TonB-dependent receptor

Position: -76
Score: 5.4
Sequence: ATTGTATACAAA
Locus tag: Sfri_0568
Name: putA
Funciton: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
putA
Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD