Regulon of HypR in Shewanella frigidimarina NCIMB 400

Properties
Regulator type:	Transcription factor
TF locus tag:	Sfri_1551
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Regulog:	HypR - Shewanellaceae
Statistics of regulated genes:
- Genes	3
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 96 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - HypR
By TF family - GntR/Others
By effector - Proline
By effector - 4-hydroxyproline
By pathway - Proline and 4-hydrohyproline utilization

Regulated operons
	Locus Tag	Name	Function
Position: -138 Score: 5.3 Sequence: ATTGTATACAAT Locus tag: Sfri_3046 Name: prdP Funciton: Proline dipeptidase
	Sfri_3046	prdP	Proline dipeptidase
Position: -244 Score: 4 Sequence: ATTGTTTATAAT Locus tag: Sfri_2628 Name: omp (COG1629) Funciton: TonB-dependent receptor
	Sfri_2628	omp (COG1629)	TonB-dependent receptor
Position: -76 Score: 5.4 Sequence: ATTGTATACAAA Locus tag: Sfri_0568 Name: putA Funciton: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
	Sfri_0568	putA	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD