Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HutC in Shewanella woodyi ATCC 51908

Properties
Regulator type: Transcription factor
TF locus tag: Swoo_4839
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Regulog: HutC - Shewanellaceae
Statistics of regulated genes:
- Genes 4
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 63 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -110
Score: 5.4
Sequence: AGTGTTGTATATACAAGTAG
Locus tag: Swoo_4838
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Swoo_4837
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
hutU
Urocanate hydratase (EC 4.2.1.49)
hutH
Histidine ammonia-lyase (EC 4.3.1.3)

Position: -95
Score: 6.5
Sequence: TAGCTTGTATATACAAGTAA
Position: -85
Score: 4.6
Sequence: ATACAAGTAAATACAAGTTG
Locus tag: Swoo_4840
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
hutI
Imidazolonepropionase (EC 3.5.2.7)

Position: -191
Score: 5.4
Sequence: CAACTTGTATTTACTTGTAT
Position: -181
Score: 6.1
Sequence: TTACTTGTATATACAAGCTA
Locus tag: Swoo_4839
Name: hutC
Funciton: Histidine utilization repressor, GntR family
hutC
Histidine utilization repressor, GntR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD