Profile of regulator HutC in Shewanellaceae
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Histidine utilization |
| Effector: |
cis-Urocanic acid |
| Regulog: |
HutC - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO0096 |
hutC |
-131 |
6.1 |
TTACTTGTATATACAAGCTA |
|
SO0095 |
hutI |
-95 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
SO0095 |
hutI |
-85 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
SO0096 |
hutC |
-141 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_0077 |
hutI |
-86 |
4.4 |
ATACAAGTAAATACAAGCCA |
|
Sputcn32_0077 |
hutI |
-96 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Sputcn32_0078 |
hutC |
-168 |
5.5 |
TGGCTTGTATTTACTTGTAT |
|
Sputcn32_0078 |
hutC |
-158 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella sp W3-18-1
|
|
Sputw3181_4000 |
hutI |
-86 |
4.4 |
ATACAAGTAAATACAAGCCA |
|
Sputw3181_4000 |
hutI |
-96 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Sputw3181_3999 |
hutC |
-168 |
5.5 |
TGGCTTGTATTTACTTGTAT |
|
Sputw3181_3999 |
hutC |
-158 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella sp ANA-3
|
|
Shewana3_0099 |
hutC |
-122 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewana3_0099 |
hutC |
-132 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
Shewana3_0098 |
hutI |
-85 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
Shewana3_0098 |
hutI |
-95 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shewanella sp MR-4
|
|
Shewmr4_0097 |
hutI |
-85 |
4.3 |
ATACAAGTAAATACAAGCTG |
|
Shewmr4_0098 |
hutC |
-132 |
5.4 |
CAGCTTGTATTTACTTGTAT |
|
Shewmr4_0098 |
hutC |
-122 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewmr4_0097 |
hutI |
-95 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shewanella sp MR-7
|
|
Shewmr7_0093 |
hutC |
-132 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
Shewmr7_0092 |
hutI |
-95 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shewmr7_0092 |
hutI |
-85 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
Shewmr7_0093 |
hutC |
-122 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella baltica OS155
|
|
Sbal_4254 |
hutI |
-96 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Sbal_4254 |
hutI |
-86 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
Sbal_4253 |
hutC |
-167 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
Sbal_4253 |
hutC |
-157 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella denitrificans OS217
|
|
Sden_0081 |
hutI |
-90 |
5.6 |
TACCTTGTATATACAAGCCA |
|
Sden_0082 |
hutC |
-86 |
5.7 |
TGGCTTGTATATACAAGGTA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_3955 |
hutI |
-70 |
5.9 |
TACCTTGTATATACAAGTTA |
|
Sfri_3955 |
hutI |
-60 |
3.9 |
ATACAAGTTAAAACAAGTAT |
|
Sfri_3954 |
hutC |
-57 |
4.6 |
ATACTTGTTTTAACTTGTAT |
|
Sfri_3954 |
hutC |
-47 |
5.8 |
TAACTTGTATATACAAGGTA |
|
Shewanella amazonensis SB2B
|
|
Sama_0080 |
hutI |
-135 |
3.4 |
ATACAAGTAGATACTGGCTG |
|
Sama_0080 |
hutI |
-145 |
6.3 |
AAACTTGTATATACAAGTAG |
|
Sama_0081 |
hutC |
-89 |
6.2 |
CTACTTGTATATACAAGTTT |
|
Sama_0081 |
hutC |
-99 |
4 |
CAGCCAGTATCTACTTGTAT |
|
Shewanella loihica PV-4
|
|
Shew_3759 |
hutI |
-85 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shew_3759 |
hutI |
-75 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
Shew_3758 |
hutC |
-128 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
Shew_3758 |
hutC |
-118 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella pealeana ATCC 700345
|
|
Spea_4171 |
hutI |
-87 |
3.9 |
ATACAAGTAAACACAAGCTA |
|
Spea_4170 |
hutC |
-96 |
5.3 |
TAGCTTGTGTTTACTTGTAT |
|
Spea_4170 |
hutC |
-86 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Spea_4171 |
hutI |
-97 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_0071 |
hutI |
-99 |
4.1 |
ATACAAGTAAATACAAGCGG |
|
Shal_0071 |
hutI |
-109 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Shal_0072 |
hutC |
-96 |
5 |
CCGCTTGTATTTACTTGTAT |
|
Shal_0072 |
hutC |
-86 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella piezotolerans WP3
|
|
swp_0131 |
hutI |
-98 |
4.5 |
ATACAAGTAAATACAAGCTA |
|
swp_0131 |
hutI |
-108 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
swp_0132 |
hutC |
-167 |
5.6 |
TAGCTTGTATTTACTTGTAT |
|
swp_0132 |
hutC |
-157 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_4449 |
hutI |
-75 |
4.6 |
ATACAAGTAAATACAAGTTG |
|
Ssed_4449 |
hutI |
-85 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Ssed_4448 |
hutC |
-140 |
5.4 |
CAACTTGTATTTACTTGTAT |
|
Ssed_4448 |
hutC |
-130 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_4840 |
hutI |
-85 |
4.6 |
ATACAAGTAAATACAAGTTG |
|
Swoo_4840 |
hutI |
-95 |
6.5 |
TAGCTTGTATATACAAGTAA |
|
Swoo_4839 |
hutC |
-191 |
5.4 |
CAACTTGTATTTACTTGTAT |
|
Swoo_4839 |
hutC |
-181 |
6.1 |
TTACTTGTATATACAAGCTA |
|
Swoo_4838 |
hutU |
-110 |
5.4 |
AGTGTTGTATATACAAGTAG |
Export
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Regulatory Sites
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