Regulon of HutC in Shewanella frigidimarina NCIMB 400
| Regulator type: | Transcription factor |
| TF locus tag: | Sfri_3954 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Histidine utilization |
| Effector: | cis-Urocanic acid |
| Regulog: | HutC - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - HutC
- By TF family - GntR/Others
- By effector - cis-Urocanic acid
- By pathway - Histidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -70
Score: 5.9 Sequence: TACCTTGTATATACAAGTTA
Position: -60
Score: 3.9 Sequence: ATACAAGTTAAAACAAGTAT
Locus tag: Sfri_3955
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7) |
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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Position: -57
Score: 4.6 Sequence: ATACTTGTTTTAACTTGTAT
Position: -47
Score: 5.8 Sequence: TAACTTGTATATACAAGGTA
Locus tag: Sfri_3954
Name: hutC Funciton: Histidine utilization repressor, GntR family
Locus tag: Sfri_3953
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: Sfri_3952
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3) |
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hutC
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Histidine utilization repressor, GntR family
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |