Regulon of FabR in Shewanella woodyi ATCC 51908

Properties
Regulator type:	Transcription factor
TF locus tag:	Swoo_4711
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Regulog:	FabR - Shewanellaceae
Statistics of regulated genes:
- Genes	11
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 118 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -88 Score: 6.5 Sequence: AGCTTACACGTGTACGCT Locus tag: Swoo_2594 Name: hylII Funciton: COG1272: Predicted membrane protein hemolysin III homolog
	Swoo_2594	hylII	COG1272: Predicted membrane protein hemolysin III homolog
Position: -34 Score: 5 Sequence: GAGGTACACCTGTACGCT Locus tag: Swoo_4860 Name: lcfE Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Swoo_4860	lcfE	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -318 Score: 5.3 Sequence: AGCTTACAACTGTACACC Locus tag: Swoo_3037 Name: fadL Funciton: Long-chain fatty acid transport protein
	Swoo_3037	fadL	Long-chain fatty acid transport protein
Position: -205 Score: 4.6 Sequence: AATAAACACGTGTAAGCT Locus tag: Swoo_1424 Name: pfaR Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR Locus tag: Swoo_1423 Name: pfaA Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA Locus tag: Swoo_1422 Name: pfaB Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB Locus tag: Swoo_1421 Name: pfaC Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
	Swoo_1424	pfaR	transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
	Swoo_1423	pfaA	omega-3 polyunsaturated fatty acid synthase subunit, PfaA
	Swoo_1422	pfaB	omega-3 polyunsaturated fatty acid synthase subunit, PfaB
	Swoo_1421	pfaC	omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Position: -167 Score: 6.1 Sequence: AGCGTACAGGTGTAAGCC Locus tag: Swoo_1504 Name: fadE3 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Swoo_1504	fadE3	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -128 Score: 6.3 Sequence: AGCGTACATCTGTACGCT Locus tag: Swoo_4711 Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family
	Swoo_4711	fabR	Unsaturated fatty acid biosythesis repressor FabR, TetR family
Position: -56 Score: 6.3 Sequence: AGCTTACACGTGTTCGCT Locus tag: Swoo_2148 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	Swoo_2148	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -41 Score: 6.3 Sequence: AGCGTACAGATGTACGCT Locus tag: Swoo_4712 Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1)
	Swoo_4712	OLE1	Fatty acid desaturase (EC 1.14.19.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD