Regulon of FabR in Shewanella pealeana ATCC 700345

Properties
Regulator type:	Transcription factor
TF locus tag:	Spea_0163
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Regulog:	FabR - Shewanellaceae
Statistics of regulated genes:
- Genes	14
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 118 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -36 Score: 6.3 Sequence: AGCTTACACGTGTTCGCT Locus tag: Spea_2385 Name: hylII Funciton: COG1272: Predicted membrane protein hemolysin III homolog
	Spea_2385	hylII	COG1272: Predicted membrane protein hemolysin III homolog
Position: -34 Score: 4.6 Sequence: GCGGAACACTTGTAAGCT Locus tag: Spea_4186 Name: lcfE Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Spea_4186	lcfE	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -319 Score: 6.4 Sequence: AGCGTACACTTGTACGCT Locus tag: Spea_2609 Name: fadL Funciton: Long-chain fatty acid transport protein
	Spea_2609	fadL	Long-chain fatty acid transport protein
Position: -104 Score: 4.8 Sequence: AGGCTACACGTGTAAACT Locus tag: Spea_3713 Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Locus tag: Spea_3712 Name: rraB Funciton: Ribonuclease E inhibitor RraB
	Spea_3713	plsC	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
	Spea_3712	rraB	Ribonuclease E inhibitor RraB
Position: -207 Score: 5.5 Sequence: AGCTTACAAGTGTTCACT Locus tag: Spea_2906 Name: pfaR Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR Locus tag: Spea_2907 Name: pfaA Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA Locus tag: Spea_2908 Name: pfaB Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB Locus tag: Spea_2909 Name: pfaC Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC Locus tag: Spea_2910 Name: pfaD Funciton: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
	Spea_2906	pfaR	transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
	Spea_2907	pfaA	omega-3 polyunsaturated fatty acid synthase subunit, PfaA
	Spea_2908	pfaB	omega-3 polyunsaturated fatty acid synthase subunit, PfaB
	Spea_2909	pfaC	omega-3 polyunsaturated fatty acid synthase subunit, PfaC
	Spea_2910	pfaD	Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
Position: -167 Score: 5.9 Sequence: AGCGTACACGCGTAAGCT Locus tag: Spea_1234 Name: fadE3 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Spea_1234	fadE3	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -55 Score: 6 Sequence: AGCGTACATCTGTACGCC Locus tag: Spea_0163 Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family
	Spea_0163	fabR	Unsaturated fatty acid biosythesis repressor FabR, TetR family
Position: -55 Score: 6.4 Sequence: AGCGTACACGTGTTCGCT Locus tag: Spea_1951 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	Spea_1951	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -9 Score: 6 Sequence: GGCGTACAGATGTACGCT Locus tag: Spea_0162 Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1)
	Spea_0162	OLE1	Fatty acid desaturase (EC 1.14.19.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FabR in Shewanella pealeana ATCC 700345

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --