Regulon of FabR in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_0192
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Regulog:	FabR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 118 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -89 Score: 5.8 Sequence: AGCGTACACATGTACTCT Locus tag: Sama_1862 Name: hylII Funciton: COG1272: Predicted membrane protein hemolysin III homolog
	Sama_1862	hylII	COG1272: Predicted membrane protein hemolysin III homolog
Position: -59 Score: 4.6 Sequence: GAGGAACACTTGTAAGCT Locus tag: Sama_3571 Name: lcfE Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Sama_3571	lcfE	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -297 Score: 6.4 Sequence: AGCGTACACATGTACGCT Locus tag: Sama_2178 Name: fadL Funciton: Long-chain fatty acid transport protein
	Sama_2178	fadL	Long-chain fatty acid transport protein
Position: -80 Score: 4.8 Sequence: AGCGCACACGTGTAAACA Locus tag: Sama_3139 Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Locus tag: Sama_3138 Name: rraB Funciton: Ribonuclease E inhibitor RraB
	Sama_3139	plsC	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
	Sama_3138	rraB	Ribonuclease E inhibitor RraB
Position: -119 Score: 6.3 Sequence: AGCGTACAGCTGTAAGCT Locus tag: Sama_0192 Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family
	Sama_0192	fabR	Unsaturated fatty acid biosythesis repressor FabR, TetR family
Position: -29 Score: 6.3 Sequence: AGCTTACAGCTGTACGCT Locus tag: Sama_0191 Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1)
	Sama_0191	OLE1	Fatty acid desaturase (EC 1.14.19.1)
Position: -58 Score: 6 Sequence: GGCGTACAGGTGTTCGCT Locus tag: Sama_1605 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	Sama_1605	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD