Regulon of FabR in Shewanella frigidimarina NCIMB 400

Properties
Regulator type:	Transcription factor
TF locus tag:	Sfri_0124
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Regulog:	FabR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 118 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -34 Score: 4.6 Sequence: GCGGAACACTTGTAAGCT Locus tag: Sfri_3973 Name: lcfE Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Sfri_3973	lcfE	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -80 Score: 4.9 Sequence: AGCGTACATATGTAAACA Locus tag: Sfri_3514 Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Locus tag: Sfri_3513 Name: rraB Funciton: Ribonuclease E inhibitor RraB
	Sfri_3514	plsC	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
	Sfri_3513	rraB	Ribonuclease E inhibitor RraB
Position: -121 Score: 6.2 Sequence: AGCGTACAATTGTACGCT Locus tag: Sfri_0124 Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family
	Sfri_0124	fabR	Unsaturated fatty acid biosythesis repressor FabR, TetR family
Position: -60 Score: 6.3 Sequence: AGCTTACACGTGTTCGCT Locus tag: Sfri_2656 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	Sfri_2656	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -94 Score: 5.4 Sequence: AGCTTACACGTGTTCACC Locus tag: Sfri_1873 Name: hylII Funciton: COG1272: Predicted membrane protein hemolysin III homolog
	Sfri_1873	hylII	COG1272: Predicted membrane protein hemolysin III homolog
Position: -53 Score: 6.2 Sequence: AGCGTACAATTGTACGCT Locus tag: Sfri_0123 Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1)
	Sfri_0123	OLE1	Fatty acid desaturase (EC 1.14.19.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD