Regulon of FabR in Shewanella oneidensis MR-1

Properties
Regulator type:	Transcription factor
TF locus tag:	SO_0198
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid biosynthesis
Effector:	Unsaturated acyl-ACP; Unsaturated acyl-CoA
Regulog:	FabR - Shewanellaceae
Statistics of regulated genes:
- Genes	8
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 118 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FabR
By TF family - TetR
By effector - Unsaturated acyl-ACP
By effector - Unsaturated acyl-CoA
By pathway - Fatty acid biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -114 Score: 6.5 Sequence: AGCGTACACGTGTAAGCT Locus tag: SO_2447 Name: hylII Funciton: COG1272: Predicted membrane protein hemolysin III homolog
	SO_2447	hylII	COG1272: Predicted membrane protein hemolysin III homolog
Position: -121 Score: 4.8 Sequence: GCGGTACACTTGTAAGCT Locus tag: SO_0075 Name: lcfE Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	SO_0075	lcfE	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -311 Score: 6.2 Sequence: GGCGTACAGGTGTACGCT Locus tag: SO_3099 Name: fadL Funciton: Long-chain fatty acid transport protein
	SO_3099	fadL	Long-chain fatty acid transport protein
Position: -80 Score: 4.9 Sequence: AGCTTACAGATGTAAACA Locus tag: SO_0567 Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) Locus tag: SO_0568 Name: rraB Funciton: Ribonuclease E inhibitor RraB
	SO_0567	plsC	1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
	SO_0568	rraB	Ribonuclease E inhibitor RraB
Position: -119 Score: 6.3 Sequence: AGCGTACAGCTGTAAGCT Locus tag: SO_0198 Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family
	SO_0198	fabR	Unsaturated fatty acid biosythesis repressor FabR, TetR family
Position: -53 Score: 6.3 Sequence: AGCTTACACGTGTTCGCT Locus tag: SO_1856 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	SO_1856	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -42 Score: 6.3 Sequence: AGCTTACAGCTGTACGCT Locus tag: SO_0197 Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1)
	SO_0197	OLE1	Fatty acid desaturase (EC 1.14.19.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD