Regulon of BirA in Shewanella sp MR-7
| Regulator type: | Transcription factor |
| TF locus tag: | Shewmr7_0177 |
| Regulator family: | BirA |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Regulog: | BirA - Shewanellaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By trascription factor - BirA
- By TF family - BirA
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -89
Score: 7.8 Sequence: TGGTAAACC-(15)-CGTTGACAG
Locus tag: Shewmr7_2431
Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Shewmr7_2430
Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Shewmr7_2429
Name: bioC Funciton: Biotin synthesis protein bioC
Locus tag: Shewmr7_2428
Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3) |
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bioB
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Biotin synthase (EC 2.8.1.6)
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bioF
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8-amino-7-oxononanoate synthase (EC 2.3.1.47)
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bioC
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Biotin synthesis protein bioC
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bioD
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Dethiobiotin synthetase (EC 6.3.3.3)
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Position: -66
Score: 7.8 Sequence: CTGTCAACG-(15)-GGTTTACCA
Locus tag: Shewmr7_2432
Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) |
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bioA
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Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |