Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator BirA in Shewanellaceae

Properties
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Regulog: BirA - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_2741 bioA -66 7.8 CTGTCAACG-(15)-GGTTTACCA
SO_2740 bioB -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella putrefaciens CN-32
Sputcn32_2346 bioA -66 7.5 CTGTCAACG-(15)-AGTTTACTA
Sputcn32_2345 bioB -90 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella sp W3-18-1
Sputw3181_1662 bioA -66 7.5 CTGTCAACG-(15)-AGTTTACTA
Sputw3181_1663 bioB -90 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella sp ANA-3
Shewana3_2520 bioA -66 7.8 CTGTCAACG-(15)-GGTTTACCA
Shewana3_2519 bioB -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella sp MR-4
Shewmr4_2360 bioA -66 7.8 CTGTCAACG-(15)-GGTTTACCA
Shewmr4_2359 bioB -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella sp MR-7
Shewmr7_2432 bioA -66 7.8 CTGTCAACG-(15)-GGTTTACCA
Shewmr7_2431 bioB -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella baltica OS155
Sbal_1757 bioA -66 7.5 CTGTCAACG-(15)-AGTTTACTA
Sbal_1758 bioB -89 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella denitrificans OS217
Sden_1658 bioB -86 6.8 TaGTcAAgt-(15)-cGTTgACAg
Sden_1657 bioA -43 6.8 cTGTcAACg-(15)-acTTgACtA
Shewanella frigidimarina NCIMB 400
Sfri_1474 bioA -60 7.3 CTGTCAACG-(15)-GCTTTACTA
Sfri_1475 bioB -87 7.3 TAGTAAAGC-(15)-CGTTGACAG
Shewanella amazonensis SB2B
Sama_1437 bioA -57 7.8 CTGTCAACG-(15)-GGTTTACTG
Sama_1438 bioB -86 7.8 CAGTAAACC-(15)-CGTTGACAG
Shewanella loihica PV-4
Shew_1718 bioA -60 8 CTGTCAACG-(15)-GGTTTACTA
Shew_1719 bioB -122 8 TAGTAAACC-(15)-CGTTGACAG
Shewanella pealeana ATCC 700345
Spea_1800 bioA -44 7.3 CTGTCAATG-(15)-GGTTTACTA
Spea_1801 bioB -238 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella halifaxensis HAW-EB4
Shal_2478 bioA -44 7.3 CTGTCAATG-(15)-GGTTTACTA
Shal_2477 bioB -236 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella piezotolerans WP3
swp_2929 bioA -44 7.3 CTGTCAATG-(15)-GGTTTACTA
swp_2928 bioB -242 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella sediminis HAW-EB3
Ssed_2777 bioA -44 8 CTGTCAACG-(15)-GGTTTACTA
Ssed_2776 bioB -99 8 TAGTAAACC-(15)-CGTTGACAG
Shewanella woodyi ATCC 51908
Swoo_1865 bioA -44 8 CTGTCAACG-(15)-GGTTTACTA
Swoo_1866 bioB -99 8 TAGTAAACC-(15)-CGTTGACAG
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