Profile of regulator BirA in Shewanellaceae
Properties
| Regulator family: |
BirA |
| Regulation mode: |
repressor |
| Biological process: |
Biotin biosynthesis |
| Effector: |
Biotin |
| Regulog: |
BirA - Shewanellaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Shewanella oneidensis MR-1
|
|
SO_2741 |
bioA |
-66 |
7.8 |
CTGTCAACG-(15)-GGTTTACCA |
|
SO_2740 |
bioB |
-89 |
7.8 |
TGGTAAACC-(15)-CGTTGACAG |
|
Shewanella putrefaciens CN-32
|
|
Sputcn32_2346 |
bioA |
-66 |
7.5 |
CTGTCAACG-(15)-AGTTTACTA |
|
Sputcn32_2345 |
bioB |
-90 |
7.5 |
TAGTAAACT-(15)-CGTTGACAG |
|
Shewanella sp W3-18-1
|
|
Sputw3181_1662 |
bioA |
-66 |
7.5 |
CTGTCAACG-(15)-AGTTTACTA |
|
Sputw3181_1663 |
bioB |
-90 |
7.5 |
TAGTAAACT-(15)-CGTTGACAG |
|
Shewanella sp ANA-3
|
|
Shewana3_2520 |
bioA |
-66 |
7.8 |
CTGTCAACG-(15)-GGTTTACCA |
|
Shewana3_2519 |
bioB |
-89 |
7.8 |
TGGTAAACC-(15)-CGTTGACAG |
|
Shewanella sp MR-4
|
|
Shewmr4_2360 |
bioA |
-66 |
7.8 |
CTGTCAACG-(15)-GGTTTACCA |
|
Shewmr4_2359 |
bioB |
-89 |
7.8 |
TGGTAAACC-(15)-CGTTGACAG |
|
Shewanella sp MR-7
|
|
Shewmr7_2432 |
bioA |
-66 |
7.8 |
CTGTCAACG-(15)-GGTTTACCA |
|
Shewmr7_2431 |
bioB |
-89 |
7.8 |
TGGTAAACC-(15)-CGTTGACAG |
|
Shewanella baltica OS155
|
|
Sbal_1757 |
bioA |
-66 |
7.5 |
CTGTCAACG-(15)-AGTTTACTA |
|
Sbal_1758 |
bioB |
-89 |
7.5 |
TAGTAAACT-(15)-CGTTGACAG |
|
Shewanella denitrificans OS217
|
|
Sden_1658 |
bioB |
-86 |
6.8 |
TaGTcAAgt-(15)-cGTTgACAg |
|
Sden_1657 |
bioA |
-43 |
6.8 |
cTGTcAACg-(15)-acTTgACtA |
|
Shewanella frigidimarina NCIMB 400
|
|
Sfri_1474 |
bioA |
-60 |
7.3 |
CTGTCAACG-(15)-GCTTTACTA |
|
Sfri_1475 |
bioB |
-87 |
7.3 |
TAGTAAAGC-(15)-CGTTGACAG |
|
Shewanella amazonensis SB2B
|
|
Sama_1437 |
bioA |
-57 |
7.8 |
CTGTCAACG-(15)-GGTTTACTG |
|
Sama_1438 |
bioB |
-86 |
7.8 |
CAGTAAACC-(15)-CGTTGACAG |
|
Shewanella loihica PV-4
|
|
Shew_1718 |
bioA |
-60 |
8 |
CTGTCAACG-(15)-GGTTTACTA |
|
Shew_1719 |
bioB |
-122 |
8 |
TAGTAAACC-(15)-CGTTGACAG |
|
Shewanella pealeana ATCC 700345
|
|
Spea_1800 |
bioA |
-44 |
7.3 |
CTGTCAATG-(15)-GGTTTACTA |
|
Spea_1801 |
bioB |
-238 |
7.3 |
TAGTAAACC-(15)-CATTGACAG |
|
Shewanella halifaxensis HAW-EB4
|
|
Shal_2478 |
bioA |
-44 |
7.3 |
CTGTCAATG-(15)-GGTTTACTA |
|
Shal_2477 |
bioB |
-236 |
7.3 |
TAGTAAACC-(15)-CATTGACAG |
|
Shewanella piezotolerans WP3
|
|
swp_2929 |
bioA |
-44 |
7.3 |
CTGTCAATG-(15)-GGTTTACTA |
|
swp_2928 |
bioB |
-242 |
7.3 |
TAGTAAACC-(15)-CATTGACAG |
|
Shewanella sediminis HAW-EB3
|
|
Ssed_2777 |
bioA |
-44 |
8 |
CTGTCAACG-(15)-GGTTTACTA |
|
Ssed_2776 |
bioB |
-99 |
8 |
TAGTAAACC-(15)-CGTTGACAG |
|
Shewanella woodyi ATCC 51908
|
|
Swoo_1865 |
bioA |
-44 |
8 |
CTGTCAACG-(15)-GGTTTACTA |
|
Swoo_1866 |
bioB |
-99 |
8 |
TAGTAAACC-(15)-CGTTGACAG |
Export
|
Regulatory Sites
|
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