Regulon of SoxR in Delftia acidovorans SPH-1
| Regulator type: | Transcription factor |
| TF locus tag: | Daci_1189 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Regulog: | SoxR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By trascription factor - SoxR
- By TF family - MerR
- By effector - Paraquat
- By pathway - Superoxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -45
Score: 5.6 Sequence: ATCTCAACCGCACTTGAGGT
Locus tag: Daci_3895
Name: PF07690 Funciton: Permease of the major facilitator superfamily |
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PF07690
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Permease of the major facilitator superfamily
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Position: -77
Score: 6.5 Sequence: ACCTCAACTTTGGTTGAGGT
Locus tag: Daci_1188
Name: PF01042 Funciton: Endoribonuclease L-PSP
Locus tag: Daci_1187
Name: PF07690 Funciton: Permease of the major facilitator superfamily |
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PF01042
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Endoribonuclease L-PSP
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PF07690
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Permease of the major facilitator superfamily
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Position: -72
Score: 6.5 Sequence: ACCTCAACCAAAGTTGAGGT
Locus tag: Daci_1189
Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family |
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soxR
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Redox-sensitive transcriptional activator, MerR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |