Profile of regulator SoxR in Comamonadaceae

Properties
Regulator family:	MerR
Regulation mode:	activator (repressor)
Biological process:	Superoxide stress response
Effector:	Paraquat
Regulog:	SoxR - Comamonadaceae

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - SoxR
By TF family - MerR
By effector - Paraquat
By pathway - Superoxide stress response

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Acidovorax avenae subsp. citrulli AAC00-1
	Aave_1362	mexE	-185	5.9	ACCTCAACAATGGTTGAGGT
	Aave_2275	PF01042	-85	6.7	ACCTCAAGTTTAGTTGAGGT
	Aave_2276	soxR	-61	6.7	ACCTCAACTAAACTTGAGGT
Comamonas testosteroni KF-1
	CtesDRAFT_3230	PF01042	-99	6.5	ACCTCAAGCTTAGTTGAGGT
	CtesDRAFT_3229	soxR	-32	6.5	ACCTCAACTAAGCTTGAGGT
Delftia acidovorans SPH-1
	Daci_3895	PF07690	-45	5.6	ATCTCAACCGCACTTGAGGT
	Daci_1189	soxR	-72	6.5	ACCTCAACCAAAGTTGAGGT
	Daci_1188	PF01042	-77	6.5	ACCTCAACTTTGGTTGAGGT
Polaromonas sp. JS666
	Bpro_1374	PF03992	-83	6.7	ACCTCAACTTTACTTGAGGT
	Bpro_1373	soxR	-33	6.7	ACCTCAAGTAAAGTTGAGGT
Variovorax paradoxus S110
	Vapar_4430	null	-35	6.2	ACCTCAAGTTAGGTTGAGGC
	Vapar_4431	soxR	-32	6.3	ACCTCAACTAAAGTCGAGGT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD